Gene
RNA
| Item | Value |
|---|---|
| gene id | G1615195 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 32362289 ~ 32362524 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cytosolic carboxypeptidase 1 isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1848562 | True | 236 | lncRNA | 0.42 | 1 | 32362289 | 32362524 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| irf2bpl | LOC106602196 | coding | downstream | 13245 | 32345908 ~ 32349044 (-) |
| dact1 | dact1 | coding | downstream | 156557 | 32189627 ~ 32205732 (-) |
| lgals3b | LOC106602243 | coding | downstream | 284734 | 32064498 ~ 32077555 (-) |
| fbxo34 | fbxo34 | coding | downstream | 299714 | 32013186 ~ 32062575 (-) |
| jmjd7 | jmjd7 | coding | downstream | 368079 | 31987475 ~ 31994210 (-) |
| arid4a | arid4a | coding | upstream | 13742 | 32376266 ~ 32398733 (-) |
| LOC110497673 | psma3 | coding | upstream | 38391 | 32400915 ~ 32414594 (-) |
| LOC110497675 | foxa1 | coding | upstream | 140415 | 32502939 ~ 32506011 (-) |
| clec14a | NA | coding | upstream | 180142 | 32542666 ~ 32545053 (-) |
| sec23a | sec23a | coding | upstream | 228948 | 32591472 ~ 32618035 (-) |
| G1615194 | NA | non-coding | downstream | 135 | 32361934 ~ 32362154 (-) |
| G1615191 | NA | non-coding | downstream | 3648 | 32358318 ~ 32358641 (-) |
| G1615162 | NA | non-coding | downstream | 58618 | 32296090 ~ 32303671 (-) |
| G1615148 | NA | non-coding | downstream | 95371 | 32266374 ~ 32266918 (-) |
| G1615128 | NA | non-coding | downstream | 127938 | 32232964 ~ 32234351 (-) |
| G1615196 | NA | non-coding | upstream | 2 | 32362526 ~ 32362820 (-) |
| G1615197 | NA | non-coding | upstream | 1389 | 32363913 ~ 32364227 (-) |
| G1615242 | NA | non-coding | upstream | 102641 | 32465165 ~ 32465640 (-) |
| G1615287 | LOC100194703 | non-coding | upstream | 162206 | 32524730 ~ 32524955 (-) |
| G1615289 | NA | non-coding | upstream | 163085 | 32525609 ~ 32525835 (-) |
| G1613722 | hipl1 | other | downstream | 555042 | 31719922 ~ 31807247 (-) |
| G1613218 | NA | other | downstream | 898393 | 31463121 ~ 31463896 (-) |
| G1611431 | LOC106602420 | other | downstream | 2326607 | 30034918 ~ 30035682 (-) |
| G1611392 | NA | other | downstream | 2406503 | 29947400 ~ 29955786 (-) |
| G1615240 | NA | other | upstream | 96006 | 32458530 ~ 32461579 (-) |
| G1615357 | LOC106602003 | other | upstream | 288402 | 32650926 ~ 32657769 (-) |
| LOC110497688 | npas3 | other | upstream | 409393 | 32770921 ~ 33161896 (-) |
| G1615793 | NA | other | upstream | 1049695 | 33412219 ~ 33413217 (-) |
| G1615810 | hectd1 | other | upstream | 1116069 | 33478593 ~ 33479436 (-) |
