Gene
RNA
| Item | Value |
|---|---|
| gene id | G1615287 |
| gene name | LOC100194703 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 32524730 ~ 32524955 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1848662 | True | 226 | lncRNA | 0.51 | 1 | 32524730 | 32524955 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497675 | foxa1 | coding | downstream | 18719 | 32502939 ~ 32506011 (-) |
| LOC110497673 | psma3 | coding | downstream | 110136 | 32400915 ~ 32414594 (-) |
| arid4a | arid4a | coding | downstream | 125997 | 32376266 ~ 32398733 (-) |
| kiaa0586 | kiaa0586 | coding | downstream | 155548 | 32222497 ~ 32369182 (-) |
| irf2bpl | LOC106602196 | coding | downstream | 175686 | 32345908 ~ 32349044 (-) |
| clec14a | NA | coding | upstream | 17711 | 32542666 ~ 32545053 (-) |
| sec23a | sec23a | coding | upstream | 66517 | 32591472 ~ 32618035 (-) |
| srp54 | LOC106602043 | coding | upstream | 93904 | 32618859 ~ 32628054 (-) |
| LOC110497688 | npas3 | coding | upstream | 245966 | 32770921 ~ 33161896 (-) |
| akap6 | akap6 | coding | upstream | 642788 | 33167743 ~ 33361399 (-) |
| G1615242 | NA | non-coding | downstream | 59090 | 32465165 ~ 32465640 (-) |
| G1615197 | NA | non-coding | downstream | 160503 | 32363913 ~ 32364227 (-) |
| G1615196 | NA | non-coding | downstream | 161910 | 32362526 ~ 32362820 (-) |
| G1615195 | NA | non-coding | downstream | 162206 | 32362289 ~ 32362524 (-) |
| G1615194 | NA | non-coding | downstream | 162576 | 32361934 ~ 32362154 (-) |
| G1615289 | NA | non-coding | upstream | 654 | 32525609 ~ 32525835 (-) |
| G1615290 | NA | non-coding | upstream | 914 | 32525869 ~ 32526077 (-) |
| G1615291 | NA | non-coding | upstream | 1157 | 32526112 ~ 32526341 (-) |
| G1615293 | NA | non-coding | upstream | 4343 | 32529298 ~ 32529601 (-) |
| G1615303 | NA | non-coding | upstream | 23961 | 32548916 ~ 32549182 (-) |
| G1615240 | NA | other | downstream | 63151 | 32458530 ~ 32461579 (-) |
| fbxo34 | fbxo34 | other | downstream | 462236 | 32013186 ~ 32062575 (-) |
| G1613722 | hipl1 | other | downstream | 717483 | 31719922 ~ 31807247 (-) |
| G1613218 | NA | other | downstream | 1060834 | 31463121 ~ 31463896 (-) |
| G1611431 | LOC106602420 | other | downstream | 2489048 | 30034918 ~ 30035682 (-) |
| G1615357 | LOC106602003 | other | upstream | 125971 | 32650926 ~ 32657769 (-) |
| G1615793 | NA | other | upstream | 887264 | 33412219 ~ 33413217 (-) |
| G1615810 | hectd1 | other | upstream | 953638 | 33478593 ~ 33479436 (-) |
| LOC110498336 | LOC106611177 | other | upstream | 2867905 | 35392412 ~ 35396783 (-) |
