Gene
RNA
| Item | Value |
|---|---|
| gene id | G1615349 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 32649587 ~ 32650492 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1848737 | True | 690 | lncRNA | 0.42 | 2 | 32649587 | 32650492 |
32,648,000
32,648,400
32,648,800
32,649,200
32,649,600
32,650,000
32,650,400
32,650,800
32,651,200
32,651,600
32,652,000
32,652,400
32,652,800
32,653,200
32,653,600
NC_048583.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| srp54 | LOC106602043 | coding | downstream | 21533 | 32618859 ~ 32628054 (-) |
| sec23a | sec23a | coding | downstream | 31552 | 32591472 ~ 32618035 (-) |
| clec14a | NA | coding | downstream | 104534 | 32542666 ~ 32545053 (-) |
| LOC110497675 | foxa1 | coding | downstream | 143576 | 32502939 ~ 32506011 (-) |
| LOC110497673 | psma3 | coding | downstream | 234993 | 32400915 ~ 32414594 (-) |
| LOC110497688 | npas3 | coding | upstream | 120429 | 32770921 ~ 33161896 (-) |
| akap6 | akap6 | coding | upstream | 517251 | 33167743 ~ 33361399 (-) |
| LOC110497690 | arhgap5 | coding | upstream | 713971 | 33364463 ~ 33401640 (-) |
| nubpl | nubpl | coding | upstream | 762728 | 33413220 ~ 33422265 (-) |
| ap4s1 | ap4s1 | coding | upstream | 854362 | 33504854 ~ 33509361 (-) |
| G1615303 | NA | non-coding | downstream | 100405 | 32548916 ~ 32549182 (-) |
| G1615293 | NA | non-coding | downstream | 119986 | 32529298 ~ 32529601 (-) |
| G1615291 | NA | non-coding | downstream | 123246 | 32526112 ~ 32526341 (-) |
| G1615290 | NA | non-coding | downstream | 123510 | 32525869 ~ 32526077 (-) |
| G1615289 | NA | non-coding | downstream | 123752 | 32525609 ~ 32525835 (-) |
| G1615352 | LOC106602024 | non-coding | upstream | 56112 | 32706604 ~ 32714044 (-) |
| G1615401 | NA | non-coding | upstream | 99247 | 32749739 ~ 32814084 (-) |
| G1615414 | NA | non-coding | upstream | 108362 | 32758854 ~ 32760174 (-) |
| G1615446 | NA | non-coding | upstream | 161318 | 32811810 ~ 32812468 (-) |
| G1615515 | NA | non-coding | upstream | 248169 | 32898661 ~ 32949340 (-) |
| G1615240 | NA | other | downstream | 188008 | 32458530 ~ 32461579 (-) |
| fbxo34 | fbxo34 | other | downstream | 587093 | 32013186 ~ 32062575 (-) |
| G1613722 | hipl1 | other | downstream | 842340 | 31719922 ~ 31807247 (-) |
| G1613218 | NA | other | downstream | 1185691 | 31463121 ~ 31463896 (-) |
| G1611431 | LOC106602420 | other | downstream | 2613905 | 30034918 ~ 30035682 (-) |
| G1615357 | LOC106602003 | other | upstream | 434 | 32650926 ~ 32657769 (-) |
| G1615793 | NA | other | upstream | 761727 | 33412219 ~ 33413217 (-) |
| G1615810 | hectd1 | other | upstream | 828101 | 33478593 ~ 33479436 (-) |
| LOC110498336 | LOC106611177 | other | upstream | 2742368 | 35392412 ~ 35396783 (-) |
