Gene
RNA
| Item | Value |
|---|---|
| gene id | G1615529 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 32952975 ~ 32957902 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1848945 | True | 290 | lncRNA | 0.47 | 2 | 32952975 | 32957902 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| srp54 | LOC106602043 | coding | downstream | 324921 | 32618859 ~ 32628054 (-) |
| sec23a | sec23a | coding | downstream | 334940 | 32591472 ~ 32618035 (-) |
| clec14a | NA | coding | downstream | 407922 | 32542666 ~ 32545053 (-) |
| LOC110497675 | foxa1 | coding | downstream | 446964 | 32502939 ~ 32506011 (-) |
| LOC110497673 | psma3 | coding | downstream | 538381 | 32400915 ~ 32414594 (-) |
| akap6 | akap6 | coding | upstream | 209841 | 33167743 ~ 33361399 (-) |
| LOC110497690 | arhgap5 | coding | upstream | 406561 | 33364463 ~ 33401640 (-) |
| nubpl | nubpl | coding | upstream | 455318 | 33413220 ~ 33422265 (-) |
| ap4s1 | ap4s1 | coding | upstream | 546952 | 33504854 ~ 33509361 (-) |
| coch | coch | coding | upstream | 578355 | 33536257 ~ 33541969 (-) |
| G1615515 | NA | non-coding | downstream | 3635 | 32898661 ~ 32949340 (-) |
| G1615520 | NA | non-coding | downstream | 11591 | 32919299 ~ 32941384 (-) |
| G1615518 | NA | non-coding | downstream | 19474 | 32909981 ~ 32933501 (-) |
| G1615401 | NA | non-coding | downstream | 138891 | 32749739 ~ 32814084 (-) |
| G1615446 | NA | non-coding | downstream | 140507 | 32811810 ~ 32812468 (-) |
| G1615541 | NA | non-coding | upstream | 15036 | 32972938 ~ 32973201 (-) |
| G1615403 | NA | non-coding | upstream | 209254 | 33167156 ~ 33167370 (-) |
| G1615665 | NA | non-coding | upstream | 213118 | 33171020 ~ 33171290 (-) |
| G1615666 | NA | non-coding | upstream | 213756 | 33171658 ~ 33171960 (-) |
| LOC110497688 | npas3 | other | downstream | 177271 | 32770921 ~ 33161896 (-) |
| G1615357 | LOC106602003 | other | downstream | 295206 | 32650926 ~ 32657769 (-) |
| G1615240 | NA | other | downstream | 491396 | 32458530 ~ 32461579 (-) |
| fbxo34 | fbxo34 | other | downstream | 890481 | 32013186 ~ 32062575 (-) |
| G1613722 | hipl1 | other | downstream | 1145728 | 31719922 ~ 31807247 (-) |
| G1615793 | NA | other | upstream | 454317 | 33412219 ~ 33413217 (-) |
| G1615810 | hectd1 | other | upstream | 520691 | 33478593 ~ 33479436 (-) |
| LOC110498336 | LOC106611177 | other | upstream | 2434958 | 35392412 ~ 35396783 (-) |
| G1619119 | NA | other | upstream | 3443652 | 36401554 ~ 36405336 (-) |
| LOC110497753 | spred1 | other | upstream | 3696621 | 36654523 ~ 36840800 (-) |
