G1614421


Basic Information

Item Value
gene id G1614421
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 32982149 ~ 32982584 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1847718
ttatatttctctcaacttatatggttatatttctctcaacttatatagttatatttctctcaacttatatagttatatttctctcaacttatatagttatatttctctcaacttatatagttatatttctctcaacttatatggttatatttctctcaacttatatagttatatttctctcaacttctatggttatatttctctcaacttatATGGCTATATTTCTCTCAACTTCTCTCAACTTATATGgttatatttctctcaacttctatggttatatttctctcaacttatatagttatatttctctcaacttatatagttatatttctctcaacttatatagttatatttctctcaacttatatagttatatttctctcaacttatatggttatatttctctcaacttCTATGGCTATATTTCTCTCAACTT

Function

NR:

description
extensin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1847718 True 436 lncRNA 0.24 1 32982149 32982584

Neighbor

gene id symbol gene type direction distance location
LOC110497687 egln3 coding upstream 231202 32707637 ~ 32750947 (+)
LOC110497685 LOC106601994 coding upstream 258430 32715876 ~ 32723719 (+)
LOC110497684 LOC106602024 coding upstream 266465 32699240 ~ 32715684 (+)
cfl2 LOC106602033 coding upstream 289037 32687789 ~ 32693112 (+)
baz1a LOC106602003 coding upstream 294574 32640559 ~ 32687575 (+)
dtd2 dtd2 coding downstream 439693 33422277 ~ 33423351 (+)
heatr5a heatr5a coding downstream 465724 33448308 ~ 33474231 (+)
hectd1 hectd1 coding downstream 493878 33421162 ~ 33504862 (+)
strn3 LOC106601852 coding downstream 525824 33508408 ~ 33536119 (+)
prkd1 prkd1 coding downstream 628308 33610892 ~ 33728505 (+)
G1614420 NA non-coding upstream 3946 32977518 ~ 32978203 (+)
G1614415 NA non-coding upstream 10418 32971484 ~ 32971731 (+)
G1614414 NA non-coding upstream 11624 32970303 ~ 32970525 (+)
G1614409 NA non-coding upstream 20174 32961690 ~ 32961975 (+)
G1614369 NA non-coding upstream 43748 32924649 ~ 32938401 (+)
G1614546 NA non-coding downstream 179545 33162129 ~ 33162339 (+)
G1614551 NA non-coding downstream 187477 33170061 ~ 33171013 (+)
G1614552 NA non-coding downstream 188518 33171102 ~ 33171384 (+)
G1614554 NA non-coding downstream 192976 33175560 ~ 33175874 (+)
G1614561 NA non-coding downstream 202541 33185125 ~ 33185337 (+)
G1614241 LOC106602099 other upstream 371732 32602478 ~ 32610417 (+)
timm9 timm9 other upstream 606467 32369230 ~ 32375682 (+)
G1613388 NA other upstream 1247502 31730859 ~ 31780333 (+)
G1613345 LOC106602337 other upstream 1320086 31657491 ~ 31662063 (+)
G1614510 NA other downstream 127677 33110261 ~ 33110861 (+)
G1614550 NA other downstream 185046 33167630 ~ 33168890 (+)
G1614581 akap6 other downstream 229273 33211857 ~ 33215968 (+)
G1614744 NA other downstream 549252 33531836 ~ 33533452 (+)
G1614761 NA other downstream 599428 33582012 ~ 33583350 (+)

Expression


Co-expression Network