G1614550


Basic Information

Item Value
gene id G1614550
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 33167630 ~ 33168890 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1847854
CATTTAATGTTCCACTTTTGCGTTTATAGTGTGAAGAGGGGAAATGATCAACGTTGAAAGATACTTGTACACGTTTAAGGTGAATCACATACAGAACAGGCATGTAAATCCAATGGTTTCCAATGAATAATGTTTATTTCTCAACATGTTTGTATATTTATTAACCATGCAGTCTAGCACTTTAAGGCCCATAATATTCCACATCACAGAACGCGTACAGTTTTACACTAAACACAAAGCATGTACACCATCATTATACGTCAAGGTCGGAGATCGTATACATAGAAACAGATGCCTGTTTCAACCTTGCCGGTTgtcctttttttctttctctcatcTTTTGAACACCTAACTGGGTAAGCAGTGTTTTAACAAAAGGTATAAGAAACAACAATAGCAAGGCACACATTTTTTTACGTTTAAAACCTTCCCTCGTACCGTTCCTCTATGTCTTaggaataaaaaaaaaaggaaatggTAGATAGATACTGAATTTAAGTCAACAGTCGTCATCAATCTTATACTACACAACACTGTTCAGCTGTTTCCAACCTGGGCCGTGTTGCATAGATAGATCTACTTGCTTTTGCCTTTCATTATGACATCGGTCCAACTTCCATTTCCTTCATCAGTTGAGTGACAACACaatcactctcttctctctctttcttaacaCACGTTGTCATGGGGCTGGAAGTCTCAGAACTCTGTGGAACTCTCAGCAGTGCTGTTCTCATAGGATTCCTCCACCCCATGTGTCCTCTTCAAATTTGACCCTACTTTGTTCTGATGCAGCAAACAAGGAAAACTTGTGCCCTGGGCTTATAACATCTGCAGCTGGTTGTACAGTACCGGATGAGATAGTGAGAAATGCCATGCAAACTGGcggaataagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtggtgagaaaTGGACGTGGGGTTTGCATGGTGGTTGGCAGAGCAGTGAGGTAGCTCAGTTCCAGTCTGGGACAGGATTAGAGGAGCAAAGGACGGCgggggtcaaaggtcaggggTCAGCGTTACAGCagccaggaggaagaggaggaagctgGAGAGCAGTCTGGACAGAGCCATGcaccaggggaacagggggaccaGGGGAGAGAGCCCAGCCCAGGCCACAGACCACCAGGATGGACACTGCACACAGGCACTTCACTCCTCTTCACAGAGGGGTTTTGGAGGTGGCTGTGGAAACACTCCCTGATTG
>TU1847853
GGTTTCCAATGAATAATGTTTATTTCTCAACATGTTTGTATATTTATTAACCATGCAGTCTAGCACTTTAAGGCCCATAATATTCCACATCACAGAACGCGTACAGTTTTACACTAAACACAAAGCATGTACACCATCATTATACGTCAAGGTCGGAGATCGTATACATAGAAACAGATGCCTGTTTCAACCTTGCCGGTTgtcctttttttctttctctcatcTTTTGAACACCTAACTGGGTAAGCAGTGTTTTAACAAAAGGTATAAGAAACAACAATAGCAAGGCACACATTTTTTTACGTTTAAAACCTTCCCTCGTACCGTTCCTCTATGTCTTaggaataaaaaaaaaaggaaatggTAGATAGATACTGAATTTAAGTCAACAGTCGTCATCAATCTTATACTACACAACACTGTTCAGCTGTTTCCAACCTGGGCCGTGTTGCATAGATAGATCTACTTGCTTTTGCCTTTCATTATGACATCGGTCCAACTTCCATTTCCTTCATCAGTTGAGTGACAACACaatcactctcttctctctctttcttaacaCACGTTGTCATGGGGCTGGAAGTCTCAGAACTCTGTGGAACTCTCAGCAGTGCTGTTCTCATAGGATTCCTCCACCCCATGTGTCCTCTTCAAATTTGACCCTACTTTGTTCTGATGCAGCAAACAAGGAAAACTTGTGCCCTGGGCTTATAACATCTGCAGCTGGTTGTACAGTACCGGATGAGATAGTGAGAAATGCCATGCAAACTGGcggaataagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtggtgagaaaTGGACGTGGGGTTTGCATGGTGGTTGGCAGAGCAGTGAGGTAGCTCAGTTCCAGTCTGGGACAGGATTAGAGGAGCAAAGGACGGCgggggtcaaaggtcaggggTCAGCGTTACAGCagccaggaggaagaggaggaagctgGAGAGCAGTCTGGACAGAGCCATGcaccaggggaacagggggaccaGGGGAGAGAGCCCAGCCCAGGCCACAGACCACCAGGATGGACACTGCACACAGGCACTTCACTCCTCTTCACAGAGGGGTTTTGGAGGTGGCTGTGGAAACACTCCCTGATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1847854 False 1261 TUCP 0.45 1 33167630 33168890
TU1847853 True 1147 TUCP 0.46 1 33167744 33168890

Neighbor

gene id symbol gene type direction distance location
LOC110497687 egln3 coding upstream 416683 32707637 ~ 32750947 (+)
LOC110497685 LOC106601994 coding upstream 443911 32715876 ~ 32723719 (+)
LOC110497684 LOC106602024 coding upstream 451946 32699240 ~ 32715684 (+)
cfl2 LOC106602033 coding upstream 474518 32687789 ~ 32693112 (+)
baz1a LOC106602003 coding upstream 480055 32640559 ~ 32687575 (+)
dtd2 dtd2 coding downstream 253387 33422277 ~ 33423351 (+)
heatr5a heatr5a coding downstream 279418 33448308 ~ 33474231 (+)
hectd1 hectd1 coding downstream 307572 33421162 ~ 33504862 (+)
strn3 LOC106601852 coding downstream 339518 33508408 ~ 33536119 (+)
prkd1 prkd1 coding downstream 442002 33610892 ~ 33728505 (+)
G1614546 NA non-coding upstream 5291 33162129 ~ 33162339 (+)
G1614421 NA non-coding upstream 185046 32982149 ~ 32982584 (+)
G1614420 NA non-coding upstream 189427 32977518 ~ 32978203 (+)
G1614415 NA non-coding upstream 195899 32971484 ~ 32971731 (+)
G1614414 NA non-coding upstream 197105 32970303 ~ 32970525 (+)
G1614551 NA non-coding downstream 1171 33170061 ~ 33171013 (+)
G1614552 NA non-coding downstream 2212 33171102 ~ 33171384 (+)
G1614554 NA non-coding downstream 6670 33175560 ~ 33175874 (+)
G1614561 NA non-coding downstream 16235 33185125 ~ 33185337 (+)
G1614564 NA non-coding downstream 19488 33188378 ~ 33188728 (+)
G1614510 NA other upstream 56769 33110261 ~ 33110861 (+)
G1614241 LOC106602099 other upstream 557213 32602478 ~ 32610417 (+)
timm9 timm9 other upstream 791948 32369230 ~ 32375682 (+)
G1613388 NA other upstream 1432983 31730859 ~ 31780333 (+)
G1614581 akap6 other downstream 42967 33211857 ~ 33215968 (+)
G1614744 NA other downstream 362946 33531836 ~ 33533452 (+)
G1614761 NA other downstream 413122 33582012 ~ 33583350 (+)
G1614914 NA other downstream 633689 33802579 ~ 33803103 (+)
G1614998 NA other downstream 741857 33910747 ~ 33981723 (+)

Expression


Co-expression Network