Gene
RNA
| Item | Value |
|---|---|
| gene id | G1615667 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 33172040 ~ 33172384 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1849089 | True | 345 | lncRNA | 0.46 | 1 | 33172040 | 33172384 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497688 | npas3 | coding | downstream | 10144 | 32770921 ~ 33161896 (-) |
| srp54 | LOC106602043 | coding | downstream | 543986 | 32618859 ~ 32628054 (-) |
| sec23a | sec23a | coding | downstream | 554005 | 32591472 ~ 32618035 (-) |
| clec14a | NA | coding | downstream | 626987 | 32542666 ~ 32545053 (-) |
| LOC110497675 | foxa1 | coding | downstream | 666029 | 32502939 ~ 32506011 (-) |
| LOC110497690 | arhgap5 | coding | upstream | 192079 | 33364463 ~ 33401640 (-) |
| nubpl | nubpl | coding | upstream | 240836 | 33413220 ~ 33422265 (-) |
| ap4s1 | ap4s1 | coding | upstream | 332470 | 33504854 ~ 33509361 (-) |
| coch | coch | coding | upstream | 363873 | 33536257 ~ 33541969 (-) |
| opn6b | LOC106602743 | coding | upstream | 374415 | 33546799 ~ 33555237 (-) |
| G1615666 | NA | non-coding | downstream | 80 | 33171658 ~ 33171960 (-) |
| G1615665 | NA | non-coding | downstream | 750 | 33171020 ~ 33171290 (-) |
| akap6 | akap6 | non-coding | downstream | 3501 | 33167743 ~ 33361399 (-) |
| G1615403 | NA | non-coding | downstream | 4670 | 33167156 ~ 33167370 (-) |
| G1615541 | NA | non-coding | downstream | 198839 | 32972938 ~ 32973201 (-) |
| G1615668 | NA | non-coding | upstream | 292 | 33172676 ~ 33172959 (-) |
| G1615676 | NA | non-coding | upstream | 12161 | 33184545 ~ 33184860 (-) |
| G1615681 | NA | non-coding | upstream | 17075 | 33189459 ~ 33189789 (-) |
| G1615683 | NA | non-coding | upstream | 19551 | 33191935 ~ 33192153 (-) |
| G1615684 | NA | non-coding | upstream | 20395 | 33192779 ~ 33193048 (-) |
| G1615357 | LOC106602003 | other | downstream | 514271 | 32650926 ~ 32657769 (-) |
| G1615240 | NA | other | downstream | 710461 | 32458530 ~ 32461579 (-) |
| fbxo34 | fbxo34 | other | downstream | 1109546 | 32013186 ~ 32062575 (-) |
| G1613722 | hipl1 | other | downstream | 1364793 | 31719922 ~ 31807247 (-) |
| G1615793 | NA | other | upstream | 239835 | 33412219 ~ 33413217 (-) |
| G1615810 | hectd1 | other | upstream | 306209 | 33478593 ~ 33479436 (-) |
| LOC110498336 | LOC106611177 | other | upstream | 2220476 | 35392412 ~ 35396783 (-) |
| G1619119 | NA | other | upstream | 3229170 | 36401554 ~ 36405336 (-) |
| LOC110497753 | spred1 | other | upstream | 3482139 | 36654523 ~ 36840800 (-) |
