G1614554


Basic Information

Item Value
gene id G1614554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 33175560 ~ 33175874 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1847860
attacagagatcatacatttcctgtagttcttgaccaggtttgcacacactgcagcagggattttggcccactcctccatacagatcttCTCCAGATCCTCCAGGTTTTGGGACTTTGTGaaaatgagacagcctatagggaggaggtcagagacctggcagtgtggtgccaggacaacaacctctccctcaatgtgagcaagacaaaagagctgattgtggactacaggaaaaggagggtcgaaccggcccccattaacatcgacgtgCTGTAGTGGCCAAGCTTCCTCCCATCcagtacctacagtatatact

Function

NR:

description
COL11A2, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1847860 True 315 lncRNA 0.50 1 33175560 33175874

Neighbor

gene id symbol gene type direction distance location
LOC110497687 egln3 coding upstream 424613 32707637 ~ 32750947 (+)
LOC110497685 LOC106601994 coding upstream 451841 32715876 ~ 32723719 (+)
LOC110497684 LOC106602024 coding upstream 459876 32699240 ~ 32715684 (+)
cfl2 LOC106602033 coding upstream 482448 32687789 ~ 32693112 (+)
baz1a LOC106602003 coding upstream 487985 32640559 ~ 32687575 (+)
dtd2 dtd2 coding downstream 246403 33422277 ~ 33423351 (+)
heatr5a heatr5a coding downstream 272434 33448308 ~ 33474231 (+)
hectd1 hectd1 coding downstream 300588 33421162 ~ 33504862 (+)
strn3 LOC106601852 coding downstream 332534 33508408 ~ 33536119 (+)
prkd1 prkd1 coding downstream 435018 33610892 ~ 33728505 (+)
G1614552 NA non-coding upstream 4176 33171102 ~ 33171384 (+)
G1614551 NA non-coding upstream 4547 33170061 ~ 33171013 (+)
G1614546 NA non-coding upstream 13221 33162129 ~ 33162339 (+)
G1614421 NA non-coding upstream 192976 32982149 ~ 32982584 (+)
G1614420 NA non-coding upstream 197357 32977518 ~ 32978203 (+)
G1614561 NA non-coding downstream 9251 33185125 ~ 33185337 (+)
G1614564 NA non-coding downstream 12504 33188378 ~ 33188728 (+)
G1614565 NA non-coding downstream 13157 33189031 ~ 33189383 (+)
G1614566 NA non-coding downstream 13534 33189408 ~ 33189624 (+)
G1614568 NA non-coding downstream 14953 33190827 ~ 33191076 (+)
G1614550 NA other upstream 6670 33167630 ~ 33168890 (+)
G1614510 NA other upstream 64699 33110261 ~ 33110861 (+)
G1614241 LOC106602099 other upstream 565143 32602478 ~ 32610417 (+)
timm9 timm9 other upstream 799878 32369230 ~ 32375682 (+)
G1614581 akap6 other downstream 35983 33211857 ~ 33215968 (+)
G1614744 NA other downstream 355962 33531836 ~ 33533452 (+)
G1614761 NA other downstream 406138 33582012 ~ 33583350 (+)
G1614914 NA other downstream 626705 33802579 ~ 33803103 (+)
G1614998 NA other downstream 734873 33910747 ~ 33981723 (+)

Expression


Co-expression Network