Gene
RNA
| Item | Value |
|---|---|
| gene id | G1615717 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 33239467 ~ 33326952 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1849146 | True | 850 | lncRNA | 0.44 | 2 | 33239467 | 33326952 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497688 | npas3 | coding | downstream | 77571 | 32770921 ~ 33161896 (-) |
| srp54 | LOC106602043 | coding | downstream | 611413 | 32618859 ~ 32628054 (-) |
| sec23a | sec23a | coding | downstream | 621432 | 32591472 ~ 32618035 (-) |
| clec14a | NA | coding | downstream | 694414 | 32542666 ~ 32545053 (-) |
| LOC110497675 | foxa1 | coding | downstream | 733456 | 32502939 ~ 32506011 (-) |
| LOC110497690 | arhgap5 | coding | upstream | 37511 | 33364463 ~ 33401640 (-) |
| nubpl | nubpl | coding | upstream | 86268 | 33413220 ~ 33422265 (-) |
| ap4s1 | ap4s1 | coding | upstream | 177902 | 33504854 ~ 33509361 (-) |
| coch | coch | coding | upstream | 209305 | 33536257 ~ 33541969 (-) |
| opn6b | LOC106602743 | coding | upstream | 219847 | 33546799 ~ 33555237 (-) |
| G1615692 | NA | non-coding | downstream | 32509 | 33206684 ~ 33206958 (-) |
| G1615693 | NA | non-coding | downstream | 33565 | 33205595 ~ 33205902 (-) |
| G1615691 | NA | non-coding | downstream | 33939 | 33202577 ~ 33205528 (-) |
| G1615690 | NA | non-coding | downstream | 34912 | 33199779 ~ 33204555 (-) |
| G1615684 | NA | non-coding | downstream | 46419 | 33192779 ~ 33193048 (-) |
| G1615838 | NA | non-coding | upstream | 83414 | 33410366 ~ 33410669 (-) |
| G1615801 | NA | non-coding | upstream | 84863 | 33411815 ~ 33412132 (-) |
| G1615889 | NA | non-coding | upstream | 245259 | 33572211 ~ 33618437 (-) |
| G1615982 | prkd1 | non-coding | upstream | 400343 | 33727295 ~ 33728492 (-) |
| G1616007 | NA | non-coding | upstream | 441836 | 33768788 ~ 33769027 (-) |
| G1615357 | LOC106602003 | other | downstream | 581698 | 32650926 ~ 32657769 (-) |
| G1615240 | NA | other | downstream | 777888 | 32458530 ~ 32461579 (-) |
| fbxo34 | fbxo34 | other | downstream | 1176973 | 32013186 ~ 32062575 (-) |
| G1613722 | hipl1 | other | downstream | 1432220 | 31719922 ~ 31807247 (-) |
| G1615793 | NA | other | upstream | 85267 | 33412219 ~ 33413217 (-) |
| G1615810 | hectd1 | other | upstream | 151641 | 33478593 ~ 33479436 (-) |
| LOC110498336 | LOC106611177 | other | upstream | 2065908 | 35392412 ~ 35396783 (-) |
| G1619119 | NA | other | upstream | 3074602 | 36401554 ~ 36405336 (-) |
| LOC110497753 | spred1 | other | upstream | 3327571 | 36654523 ~ 36840800 (-) |
