Gene
RNA
| Item | Value |
|---|---|
| gene id | G1615801 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 33411815 ~ 33412132 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1849232 | True | 318 | lncRNA | 0.39 | 1 | 33411815 | 33412132 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497690 | arhgap5 | coding | downstream | 10175 | 33364463 ~ 33401640 (-) |
| akap6 | akap6 | coding | downstream | 50416 | 33167743 ~ 33361399 (-) |
| LOC110497688 | npas3 | coding | downstream | 249919 | 32770921 ~ 33161896 (-) |
| srp54 | LOC106602043 | coding | downstream | 783761 | 32618859 ~ 32628054 (-) |
| sec23a | sec23a | coding | downstream | 793780 | 32591472 ~ 32618035 (-) |
| nubpl | nubpl | coding | upstream | 1088 | 33413220 ~ 33422265 (-) |
| ap4s1 | ap4s1 | coding | upstream | 92722 | 33504854 ~ 33509361 (-) |
| coch | coch | coding | upstream | 124125 | 33536257 ~ 33541969 (-) |
| opn6b | LOC106602743 | coding | upstream | 134667 | 33546799 ~ 33555237 (-) |
| scfd1 | scfd1 | coding | upstream | 143335 | 33555467 ~ 33578230 (-) |
| G1615838 | NA | non-coding | downstream | 1146 | 33410366 ~ 33410669 (-) |
| G1615717 | NA | non-coding | downstream | 84863 | 33239467 ~ 33326952 (-) |
| G1615760 | NA | non-coding | downstream | 110117 | 33301275 ~ 33301698 (-) |
| G1615692 | NA | non-coding | downstream | 204857 | 33206684 ~ 33206958 (-) |
| G1615693 | NA | non-coding | downstream | 205913 | 33205595 ~ 33205902 (-) |
| G1615889 | NA | non-coding | upstream | 160079 | 33572211 ~ 33618437 (-) |
| G1615982 | prkd1 | non-coding | upstream | 315163 | 33727295 ~ 33728492 (-) |
| G1616007 | NA | non-coding | upstream | 356656 | 33768788 ~ 33769027 (-) |
| G1616009 | NA | non-coding | upstream | 359745 | 33771877 ~ 33772112 (-) |
| G1616027 | NA | non-coding | upstream | 386774 | 33798906 ~ 33799128 (-) |
| G1615357 | LOC106602003 | other | downstream | 754046 | 32650926 ~ 32657769 (-) |
| G1615240 | NA | other | downstream | 950236 | 32458530 ~ 32461579 (-) |
| fbxo34 | fbxo34 | other | downstream | 1349321 | 32013186 ~ 32062575 (-) |
| G1613722 | hipl1 | other | downstream | 1604568 | 31719922 ~ 31807247 (-) |
| G1615793 | NA | other | upstream | 87 | 33412219 ~ 33413217 (-) |
| G1615810 | hectd1 | other | upstream | 66461 | 33478593 ~ 33479436 (-) |
| LOC110498336 | LOC106611177 | other | upstream | 1980728 | 35392412 ~ 35396783 (-) |
| G1619119 | NA | other | upstream | 2989422 | 36401554 ~ 36405336 (-) |
| LOC110497753 | spred1 | other | upstream | 3242391 | 36654523 ~ 36840800 (-) |
