G1615793


Basic Information

Item Value
gene id G1615793
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 33412219 ~ 33413217 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1849224
gtcccgaagccactcctgtgttgtattggctgtgcgcttagggtcgttgtcctgttggaagatgaaccttcgacccagtctgaggtcctgagggctctggagcaggttttcatcaaggatctcgctgtacttcgttcatctttccctcgatcctgagtaGTCTCTAagaccctgccgctgaaaaacatacccccacagcatgatgcttcatcgtagggatggtgccaggtttcctccagacgtgacacttggcattcaggccaaagagttcaatcttggtttcatcagatcagagaatcttgcttgtcatgatctgagagtccttgacgtgccttttggcaaactctaagcgggctctcatgtgccttttactaaggagtgacttccatctggccattctaccataaaggcctgattggtagagtgctgcagagatggttgtcctggaaggttctcccatctccactgaggaactcccgagctctgtcagagtgaccatcaggttctctGTCACTTCCCTGacccaaggcccttcttccccgattgctcagtttgaccgggtggccagctctaggaagaatcttgttggttccaaacttcttccatttaagaatgatggagggcactgttcttggggactttcaatgctgcagacatttttttggtacccttccccagatctgtgcgttgacacaatcctgtctcggagctctacggacaattccttcgacttaatggcttggttttggctctgacatgcactgtcaactgtgggacaggtgtgtgcctttccaaatcatgtcaaatcaattgaatttcaatcaaattgtagaaacatctcaaaaatgatcaatggaaacaggatggacctgtgctacattttgagtctcatagcaaagggcctaaATAGTTATggaaataaggtatctgtttttaatttaacaaatttgcaaaaatgtctaaaaacctgttttcgctttgtcgttatggggcattgtg

Function

NR:

description
Putative transposase

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1849224 True 999 TUCP 0.47 1 33412219 33413217

Neighbor

gene id symbol gene type direction distance location
LOC110497690 arhgap5 coding downstream 10579 33364463 ~ 33401640 (-)
akap6 akap6 coding downstream 50820 33167743 ~ 33361399 (-)
LOC110497688 npas3 coding downstream 250323 32770921 ~ 33161896 (-)
srp54 LOC106602043 coding downstream 784165 32618859 ~ 32628054 (-)
sec23a sec23a coding downstream 794184 32591472 ~ 32618035 (-)
nubpl nubpl coding upstream 3 33413220 ~ 33422265 (-)
ap4s1 ap4s1 coding upstream 91637 33504854 ~ 33509361 (-)
coch coch coding upstream 123040 33536257 ~ 33541969 (-)
opn6b LOC106602743 coding upstream 133582 33546799 ~ 33555237 (-)
scfd1 scfd1 coding upstream 142250 33555467 ~ 33578230 (-)
G1615801 NA non-coding downstream 87 33411815 ~ 33412132 (-)
G1615838 NA non-coding downstream 1550 33410366 ~ 33410669 (-)
G1615717 NA non-coding downstream 85267 33239467 ~ 33326952 (-)
G1615760 NA non-coding downstream 110521 33301275 ~ 33301698 (-)
G1615692 NA non-coding downstream 205261 33206684 ~ 33206958 (-)
G1615889 NA non-coding upstream 158994 33572211 ~ 33618437 (-)
G1615982 prkd1 non-coding upstream 314078 33727295 ~ 33728492 (-)
G1616007 NA non-coding upstream 355571 33768788 ~ 33769027 (-)
G1616009 NA non-coding upstream 358660 33771877 ~ 33772112 (-)
G1616027 NA non-coding upstream 385689 33798906 ~ 33799128 (-)
G1615357 LOC106602003 other downstream 754450 32650926 ~ 32657769 (-)
G1615240 NA other downstream 950640 32458530 ~ 32461579 (-)
fbxo34 fbxo34 other downstream 1349725 32013186 ~ 32062575 (-)
G1613722 hipl1 other downstream 1604972 31719922 ~ 31807247 (-)
G1615810 hectd1 other upstream 65376 33478593 ~ 33479436 (-)
LOC110498336 LOC106611177 other upstream 1979643 35392412 ~ 35396783 (-)
G1619119 NA other upstream 2988337 36401554 ~ 36405336 (-)
LOC110497753 spred1 other upstream 3241306 36654523 ~ 36840800 (-)
G1622757 LOC106600509 other upstream 5543807 38957024 ~ 38958974 (-)

Expression


Co-expression Network