Gene
RNA
| Item | Value |
|---|---|
| gene id | G1615889 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 33572211 ~ 33618437 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1849325 | True | 297 | lncRNA | 0.41 | 2 | 33572211 | 33618437 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| opn6b | LOC106602743 | coding | downstream | 16974 | 33546799 ~ 33555237 (-) |
| coch | coch | coding | downstream | 30242 | 33536257 ~ 33541969 (-) |
| ap4s1 | ap4s1 | coding | downstream | 62850 | 33504854 ~ 33509361 (-) |
| nubpl | nubpl | coding | downstream | 149946 | 33413220 ~ 33422265 (-) |
| LOC110497690 | arhgap5 | coding | downstream | 170571 | 33364463 ~ 33401640 (-) |
| foxg1a | foxg1 | coding | upstream | 225015 | 33843452 ~ 33845841 (-) |
| sptbn5 | sptbn5 | coding | upstream | 234508 | 33852945 ~ 33907531 (-) |
| ehd4 | ehd4 | coding | upstream | 292172 | 33910609 ~ 33935156 (-) |
| LOC110497707 | LOC106600975 | coding | upstream | 323119 | 33941556 ~ 33957602 (-) |
| rcor1 | LOC106600978 | coding | upstream | 339843 | 33958280 ~ 33969217 (-) |
| G1615801 | NA | non-coding | downstream | 160079 | 33411815 ~ 33412132 (-) |
| G1615838 | NA | non-coding | downstream | 161542 | 33410366 ~ 33410669 (-) |
| G1615717 | NA | non-coding | downstream | 245259 | 33239467 ~ 33326952 (-) |
| G1615760 | NA | non-coding | downstream | 270513 | 33301275 ~ 33301698 (-) |
| G1615692 | NA | non-coding | downstream | 365253 | 33206684 ~ 33206958 (-) |
| G1615982 | prkd1 | non-coding | upstream | 108858 | 33727295 ~ 33728492 (-) |
| G1616007 | NA | non-coding | upstream | 150351 | 33768788 ~ 33769027 (-) |
| G1616009 | NA | non-coding | upstream | 153440 | 33771877 ~ 33772112 (-) |
| G1616027 | NA | non-coding | upstream | 180469 | 33798906 ~ 33799128 (-) |
| G1616036 | NA | non-coding | upstream | 201109 | 33819546 ~ 33819798 (-) |
| G1615810 | hectd1 | other | downstream | 92775 | 33478593 ~ 33479436 (-) |
| G1615793 | NA | other | downstream | 158994 | 33412219 ~ 33413217 (-) |
| LOC110497688 | npas3 | other | downstream | 796507 | 32770921 ~ 33161896 (-) |
| G1615357 | LOC106602003 | other | downstream | 914442 | 32650926 ~ 32657769 (-) |
| G1615240 | NA | other | downstream | 1110632 | 32458530 ~ 32461579 (-) |
| LOC110498336 | LOC106611177 | other | upstream | 1774423 | 35392412 ~ 35396783 (-) |
| G1619119 | NA | other | upstream | 2783117 | 36401554 ~ 36405336 (-) |
| LOC110497753 | spred1 | other | upstream | 3036086 | 36654523 ~ 36840800 (-) |
| G1622757 | LOC106600509 | other | upstream | 5338587 | 38957024 ~ 38958974 (-) |
| si:dkey-229e3.2 | LOC106599591 | other | upstream | 5746820 | 39365257 ~ 39370631 (-) |
