Gene
RNA
| Item | Value |
|---|---|
| gene id | G1616060 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 33851213 ~ 33851521 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1849505 | True | 309 | lncRNA | 0.39 | 1 | 33851213 | 33851521 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| foxg1a | foxg1 | coding | downstream | 5372 | 33843452 ~ 33845841 (-) |
| g2e3 | g2e3 | coding | downstream | 245619 | 33583646 ~ 33605594 (-) |
| scfd1 | scfd1 | coding | downstream | 272983 | 33555467 ~ 33578230 (-) |
| opn6b | LOC106602743 | coding | downstream | 295976 | 33546799 ~ 33555237 (-) |
| coch | coch | coding | downstream | 309244 | 33536257 ~ 33541969 (-) |
| sptbn5 | sptbn5 | coding | upstream | 1424 | 33852945 ~ 33907531 (-) |
| ehd4 | ehd4 | coding | upstream | 59088 | 33910609 ~ 33935156 (-) |
| LOC110497707 | LOC106600975 | coding | upstream | 90035 | 33941556 ~ 33957602 (-) |
| rcor1 | LOC106600978 | coding | upstream | 106759 | 33958280 ~ 33969217 (-) |
| tecpr2 | LOC106600983 | coding | upstream | 123501 | 33975022 ~ 34009037 (-) |
| G1616059 | NA | non-coding | downstream | 213 | 33850773 ~ 33851000 (-) |
| G1616056 | NA | non-coding | downstream | 3802 | 33847201 ~ 33847411 (-) |
| G1616048 | NA | non-coding | downstream | 16585 | 33834417 ~ 33834628 (-) |
| G1616036 | NA | non-coding | downstream | 31415 | 33819546 ~ 33819798 (-) |
| G1616027 | NA | non-coding | downstream | 52085 | 33798906 ~ 33799128 (-) |
| G1616061 | NA | non-coding | upstream | 186 | 33851707 ~ 33852291 (-) |
| LOC110498334 | NA | non-coding | upstream | 172629 | 34024150 ~ 34033284 (-) |
| G1616116 | NA | non-coding | upstream | 178812 | 34030333 ~ 34030546 (-) |
| G1616125 | NA | non-coding | upstream | 187570 | 34039091 ~ 34039345 (-) |
| G1616151 | LOC106601017 | non-coding | upstream | 201871 | 34053392 ~ 34054457 (-) |
| G1615810 | hectd1 | other | downstream | 371777 | 33478593 ~ 33479436 (-) |
| G1615793 | NA | other | downstream | 437996 | 33412219 ~ 33413217 (-) |
| LOC110497688 | npas3 | other | downstream | 1075509 | 32770921 ~ 33161896 (-) |
| G1615357 | LOC106602003 | other | downstream | 1193444 | 32650926 ~ 32657769 (-) |
| G1615240 | NA | other | downstream | 1389634 | 32458530 ~ 32461579 (-) |
| LOC110498336 | LOC106611177 | other | upstream | 1541339 | 35392412 ~ 35396783 (-) |
| G1619119 | NA | other | upstream | 2550033 | 36401554 ~ 36405336 (-) |
| LOC110497753 | spred1 | other | upstream | 2803002 | 36654523 ~ 36840800 (-) |
| G1622757 | LOC106600509 | other | upstream | 5105503 | 38957024 ~ 38958974 (-) |
| si:dkey-229e3.2 | LOC106599591 | other | upstream | 5513736 | 39365257 ~ 39370631 (-) |
