Gene
RNA
| Item | Value |
|---|---|
| gene id | G1616061 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 33851707 ~ 33852291 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1849506 | True | 585 | lncRNA | 0.34 | 1 | 33851707 | 33852291 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| foxg1a | foxg1 | coding | downstream | 5866 | 33843452 ~ 33845841 (-) |
| g2e3 | g2e3 | coding | downstream | 246113 | 33583646 ~ 33605594 (-) |
| scfd1 | scfd1 | coding | downstream | 273477 | 33555467 ~ 33578230 (-) |
| opn6b | LOC106602743 | coding | downstream | 296470 | 33546799 ~ 33555237 (-) |
| coch | coch | coding | downstream | 309738 | 33536257 ~ 33541969 (-) |
| sptbn5 | sptbn5 | coding | upstream | 654 | 33852945 ~ 33907531 (-) |
| ehd4 | ehd4 | coding | upstream | 58318 | 33910609 ~ 33935156 (-) |
| LOC110497707 | LOC106600975 | coding | upstream | 89265 | 33941556 ~ 33957602 (-) |
| rcor1 | LOC106600978 | coding | upstream | 105989 | 33958280 ~ 33969217 (-) |
| tecpr2 | LOC106600983 | coding | upstream | 122731 | 33975022 ~ 34009037 (-) |
| G1616060 | NA | non-coding | downstream | 186 | 33851213 ~ 33851521 (-) |
| G1616059 | NA | non-coding | downstream | 707 | 33850773 ~ 33851000 (-) |
| G1616056 | NA | non-coding | downstream | 4296 | 33847201 ~ 33847411 (-) |
| G1616048 | NA | non-coding | downstream | 17079 | 33834417 ~ 33834628 (-) |
| G1616036 | NA | non-coding | downstream | 31909 | 33819546 ~ 33819798 (-) |
| LOC110498334 | NA | non-coding | upstream | 171859 | 34024150 ~ 34033284 (-) |
| G1616116 | NA | non-coding | upstream | 178042 | 34030333 ~ 34030546 (-) |
| G1616125 | NA | non-coding | upstream | 186800 | 34039091 ~ 34039345 (-) |
| G1616151 | LOC106601017 | non-coding | upstream | 201101 | 34053392 ~ 34054457 (-) |
| G1616144 | NA | non-coding | upstream | 210446 | 34062737 ~ 34063198 (-) |
| G1615810 | hectd1 | other | downstream | 372271 | 33478593 ~ 33479436 (-) |
| G1615793 | NA | other | downstream | 438490 | 33412219 ~ 33413217 (-) |
| LOC110497688 | npas3 | other | downstream | 1076003 | 32770921 ~ 33161896 (-) |
| G1615357 | LOC106602003 | other | downstream | 1193938 | 32650926 ~ 32657769 (-) |
| G1615240 | NA | other | downstream | 1390128 | 32458530 ~ 32461579 (-) |
| LOC110498336 | LOC106611177 | other | upstream | 1540569 | 35392412 ~ 35396783 (-) |
| G1619119 | NA | other | upstream | 2549263 | 36401554 ~ 36405336 (-) |
| LOC110497753 | spred1 | other | upstream | 2802232 | 36654523 ~ 36840800 (-) |
| G1622757 | LOC106600509 | other | upstream | 5104733 | 38957024 ~ 38958974 (-) |
| si:dkey-229e3.2 | LOC106599591 | other | upstream | 5512966 | 39365257 ~ 39370631 (-) |
