Gene
RNA
| Item | Value |
|---|---|
| gene id | G1616238 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 34136866 ~ 34138001 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| apoptosis-stimulating of p53 protein 1-like isoform X10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1849706 | True | 1109 | lncRNA | 0.59 | 2 | 34136866 | 34138001 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497713 | LOC106601641 | coding | downstream | 55634 | 34076809 ~ 34081232 (-) |
| LOC110498334 | NA | coding | downstream | 103582 | 34024150 ~ 34033284 (-) |
| LOC110498333 | NA | coding | downstream | 113426 | 34021006 ~ 34023440 (-) |
| tecpr2 | LOC106600983 | coding | downstream | 127829 | 33975022 ~ 34009037 (-) |
| rcor1 | LOC106600978 | coding | downstream | 167649 | 33958280 ~ 33969217 (-) |
| LOC110497721 | LOC106601106 | coding | upstream | 726845 | 34864846 ~ 34919404 (-) |
| LOC110497722 | LOC106601115 | coding | upstream | 1184741 | 35322742 ~ 35327947 (-) |
| LOC110497723 | LOC106601119 | coding | upstream | 1190792 | 35328793 ~ 35336408 (-) |
| LOC110497725 | LOC106601170 | coding | upstream | 1223012 | 35361013 ~ 35377653 (-) |
| LOC110498336 | LOC106611177 | coding | upstream | 1254411 | 35392412 ~ 35396783 (-) |
| G1616235 | NA | non-coding | downstream | 2803 | 34132906 ~ 34134063 (-) |
| G1616234 | NA | non-coding | downstream | 4207 | 34131917 ~ 34132659 (-) |
| G1616218 | NA | non-coding | downstream | 23126 | 34111013 ~ 34113740 (-) |
| G1616155 | NA | non-coding | downstream | 67046 | 34069568 ~ 34069820 (-) |
| G1616143 | NA | non-coding | downstream | 73123 | 34063595 ~ 34063743 (-) |
| G1616248 | NA | non-coding | upstream | 14808 | 34152809 ~ 34153123 (-) |
| G1616478 | NA | non-coding | upstream | 213152 | 34351153 ~ 34351353 (-) |
| G1616631 | NA | non-coding | upstream | 313199 | 34451200 ~ 34451412 (-) |
| G1616663 | NA | non-coding | upstream | 354406 | 34492407 ~ 34495222 (-) |
| G1616672 | NA | non-coding | upstream | 361148 | 34499149 ~ 34499388 (-) |
| G1615810 | hectd1 | other | downstream | 657430 | 33478593 ~ 33479436 (-) |
| G1615793 | NA | other | downstream | 723649 | 33412219 ~ 33413217 (-) |
| LOC110497688 | npas3 | other | downstream | 1361162 | 32770921 ~ 33161896 (-) |
| G1615357 | LOC106602003 | other | downstream | 1479097 | 32650926 ~ 32657769 (-) |
| G1615240 | NA | other | downstream | 1675287 | 32458530 ~ 32461579 (-) |
| G1619119 | NA | other | upstream | 2263553 | 36401554 ~ 36405336 (-) |
| LOC110497753 | spred1 | other | upstream | 2516522 | 36654523 ~ 36840800 (-) |
| G1622757 | LOC106600509 | other | upstream | 4819023 | 38957024 ~ 38958974 (-) |
| si:dkey-229e3.2 | LOC106599591 | other | upstream | 5227256 | 39365257 ~ 39370631 (-) |
