Gene
RNA
| Item | Value |
|---|---|
| gene id | G1617822 |
| gene name | LOC106601134 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 35345642 ~ 35349271 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cTAGE family member 5-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1851366 | True | 727 | lncRNA | 0.48 | 5 | 35345642 | 35349271 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497723 | LOC106601119 | coding | downstream | 9234 | 35328793 ~ 35336408 (-) |
| LOC110497722 | LOC106601115 | coding | downstream | 17695 | 35322742 ~ 35327947 (-) |
| LOC110497721 | LOC106601106 | coding | downstream | 426238 | 34864846 ~ 34919404 (-) |
| LOC110497713 | LOC106601641 | coding | downstream | 1264410 | 34076809 ~ 34081232 (-) |
| LOC110498334 | NA | coding | downstream | 1312358 | 34024150 ~ 34033284 (-) |
| LOC110497725 | LOC106601170 | coding | upstream | 11742 | 35361013 ~ 35377653 (-) |
| LOC110498336 | LOC106611177 | coding | upstream | 43141 | 35392412 ~ 35396783 (-) |
| LOC110497729 | LOC106601178 | coding | upstream | 89855 | 35439126 ~ 35441887 (-) |
| ralgapa1 | ralgapa1 | coding | upstream | 110941 | 35460212 ~ 35538762 (-) |
| LOC110497737 | LOC103380713 | coding | upstream | 298433 | 35647704 ~ 35661845 (-) |
| G1617856 | NA | non-coding | downstream | 5271 | 35339953 ~ 35340371 (-) |
| G1617854 | NA | non-coding | downstream | 7322 | 35337717 ~ 35338320 (-) |
| G1617852 | NA | non-coding | downstream | 12074 | 35333196 ~ 35333568 (-) |
| G1617849 | NA | non-coding | downstream | 17139 | 35328272 ~ 35328503 (-) |
| G1617838 | NA | non-coding | downstream | 39044 | 35306332 ~ 35306598 (-) |
| G1617870 | NA | non-coding | upstream | 16799 | 35366070 ~ 35366469 (-) |
| G1617873 | NA | non-coding | upstream | 23136 | 35372407 ~ 35372808 (-) |
| G1617881 | NA | non-coding | upstream | 33306 | 35382577 ~ 35383134 (-) |
| G1617882 | NA | non-coding | upstream | 33934 | 35383205 ~ 35383441 (-) |
| G1615810 | hectd1 | other | downstream | 1866206 | 33478593 ~ 33479436 (-) |
| G1615793 | NA | other | downstream | 1932425 | 33412219 ~ 33413217 (-) |
| LOC110497688 | npas3 | other | downstream | 2569938 | 32770921 ~ 33161896 (-) |
| G1615357 | LOC106602003 | other | downstream | 2687873 | 32650926 ~ 32657769 (-) |
| G1615240 | NA | other | downstream | 2884063 | 32458530 ~ 32461579 (-) |
| G1619119 | NA | other | upstream | 1052283 | 36401554 ~ 36405336 (-) |
| LOC110497753 | spred1 | other | upstream | 1305252 | 36654523 ~ 36840800 (-) |
| G1622757 | LOC106600509 | other | upstream | 3607753 | 38957024 ~ 38958974 (-) |
| si:dkey-229e3.2 | LOC106599591 | other | upstream | 4015986 | 39365257 ~ 39370631 (-) |
