G1617883


Basic Information

Item Value
gene id G1617883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 35386105 ~ 35387259 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1851429
AAAATACTATATTTTActaaaattattatataaaaGCTTTCAAATGAAACCGGTTTCCATTAAATTagaaaatatttgtttttcaGTATGTTGGACTCCTAAGATTTCCTTTCCTTGTGTGTACATAGTACATTAGAGTGGAAAAATAAATAGTTTAGCATCTGTCTTAATAAAGTGTCTCTTGGCATTTCAAACTCTTTGGGCAATTTTACACACGGTAAAAAGTAGTTATCTTGACAATACTGCGTTCCAAAAGAGAGTAGCCAATTTTAACATGTTTGGCTTTACCTTAGGCATCCCTCACAAGCCCTGTAAACTGAGAAGGGACAATAGCAGATAAGGTCAGCTCTAGCAgagatacagtgagctccaaaagtattgggacagtgacacgttTTTGTTTTGGCTATGTACTCCAGCACTTTTgatgcagactgtcagctttaatttgaaggtattttcatccatatgagcagtttagaaatgacagcacttTTTGTAGATGGTCTCCCCCCCCATTTCAGGAGCCCAAAAGTATTGTGACAAATACACTTGTGTATCCAAGTTGTCAAAAgtttatttggtcccatattcttagcacacaatgattacatcaagcgtATGACTCTACAAACTCGTTGGAGTCATTTGctgttttgtttgtgtttcagattattttgtgcccaatttGTGTTAGGAATATTGGACCAAATACATTGAATTTGTTCCAGTACTTTTAgttcccccattttaggggaccatgTACAAAAAgtcagtcattgtatcatttcaaattcaaagtgctggagtagagccaaaacaacaaatggtcactgtcccaatacttttggagctcactgtatttcTAAATATATAGCCCTGGATAACAGTAATGTCTAAAGTCTTTGCACAGATGCCAATGAGCAACGTGTGAAGTTATTACATTAAAGGCCTGGGGACAGATTCTAACAGTAACATGTTTGTGGGCATTCTGAAATGAAAATAGATTTTCCATTCAAATAAATCTGTACTATTCCATAACATTGTGCACATCTGGAATGGTTTTAGAAAAAGGTAACTTATCTTGCTGAAAATAACTTATTGTATAACAATGTTATTATGTACCTGAAAAAATAAATCAAAGACATTTCTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1851429 True 1155 lncRNA 0.35 1 35386105 35387259

Neighbor

gene id symbol gene type direction distance location
LOC110497725 LOC106601170 coding downstream 8452 35361013 ~ 35377653 (-)
LOC110497723 LOC106601119 coding downstream 49697 35328793 ~ 35336408 (-)
LOC110497722 LOC106601115 coding downstream 58158 35322742 ~ 35327947 (-)
LOC110497721 LOC106601106 coding downstream 466701 34864846 ~ 34919404 (-)
LOC110497713 LOC106601641 coding downstream 1304873 34076809 ~ 34081232 (-)
LOC110498336 LOC106611177 coding upstream 5153 35392412 ~ 35396783 (-)
LOC110497729 LOC106601178 coding upstream 51867 35439126 ~ 35441887 (-)
ralgapa1 ralgapa1 coding upstream 72953 35460212 ~ 35538762 (-)
LOC110497737 LOC103380713 coding upstream 260445 35647704 ~ 35661845 (-)
LOC110497733 LOC106601249 coding upstream 302210 35689469 ~ 35703718 (-)
G1617882 NA non-coding downstream 2664 35383205 ~ 35383441 (-)
G1617881 NA non-coding downstream 2971 35382577 ~ 35383134 (-)
G1617873 NA non-coding downstream 13297 35372407 ~ 35372808 (-)
G1617870 NA non-coding downstream 19636 35366070 ~ 35366469 (-)
G1617888 NA non-coding upstream 208 35387467 ~ 35388027 (-)
G1617887 NA non-coding upstream 1460 35388719 ~ 35389427 (-)
G1617886 NA non-coding upstream 4292 35391551 ~ 35391791 (-)
G1617914 NA non-coding upstream 49043 35436302 ~ 35436528 (-)
G1618066 NA non-coding upstream 62301 35449560 ~ 35450923 (-)
G1615810 hectd1 other downstream 1906669 33478593 ~ 33479436 (-)
G1615793 NA other downstream 1972888 33412219 ~ 33413217 (-)
LOC110497688 npas3 other downstream 2610401 32770921 ~ 33161896 (-)
G1615357 LOC106602003 other downstream 2728336 32650926 ~ 32657769 (-)
G1615240 NA other downstream 2924526 32458530 ~ 32461579 (-)
G1619119 NA other upstream 1014295 36401554 ~ 36405336 (-)
LOC110497753 spred1 other upstream 1267264 36654523 ~ 36840800 (-)
G1622757 LOC106600509 other upstream 3569765 38957024 ~ 38958974 (-)
si:dkey-229e3.2 LOC106599591 other upstream 3977998 39365257 ~ 39370631 (-)

Expression


Co-expression Network