Gene
RNA
| Item | Value |
|---|---|
| gene id | G1618107 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 35602940 ~ 35603894 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: histidine-rich glycoprotein-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1851702 | True | 822 | lncRNA | 0.48 | 2 | 35602940 | 35603894 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ralgapa1 | ralgapa1 | coding | downstream | 64178 | 35460212 ~ 35538762 (-) |
| LOC110497729 | LOC106601178 | coding | downstream | 161053 | 35439126 ~ 35441887 (-) |
| LOC110498336 | LOC106611177 | coding | downstream | 207620 | 35392412 ~ 35396783 (-) |
| LOC110497725 | LOC106601170 | coding | downstream | 225287 | 35361013 ~ 35377653 (-) |
| LOC110497723 | LOC106601119 | coding | downstream | 266532 | 35328793 ~ 35336408 (-) |
| LOC110497737 | LOC103380713 | coding | upstream | 43810 | 35647704 ~ 35661845 (-) |
| LOC110497733 | LOC106601249 | coding | upstream | 85575 | 35689469 ~ 35703718 (-) |
| zgc:174356 | LOC106601284 | coding | upstream | 291718 | 35895612 ~ 35935389 (-) |
| LOC110497741 | LOC106601320 | coding | upstream | 621333 | 36225227 ~ 36237234 (-) |
| ccdc88c | LOC106601343 | coding | upstream | 636886 | 36240780 ~ 36323039 (-) |
| G1618091 | NA | non-coding | downstream | 69729 | 35522008 ~ 35533211 (-) |
| G1618069 | NA | non-coding | downstream | 147901 | 35454631 ~ 35455039 (-) |
| G1618066 | NA | non-coding | downstream | 152017 | 35449560 ~ 35450923 (-) |
| G1617914 | NA | non-coding | downstream | 166412 | 35436302 ~ 35436528 (-) |
| G1618137 | NA | non-coding | upstream | 7283 | 35611177 ~ 35611476 (-) |
| G1618162 | NA | non-coding | upstream | 41894 | 35645788 ~ 35646011 (-) |
| G1618163 | NA | non-coding | upstream | 42229 | 35646123 ~ 35646348 (-) |
| G1618184 | NA | non-coding | upstream | 101149 | 35705043 ~ 35705339 (-) |
| G1618186 | NA | non-coding | upstream | 102229 | 35706123 ~ 35706815 (-) |
| G1615810 | hectd1 | other | downstream | 2123504 | 33478593 ~ 33479436 (-) |
| G1615793 | NA | other | downstream | 2189723 | 33412219 ~ 33413217 (-) |
| LOC110497688 | npas3 | other | downstream | 2827236 | 32770921 ~ 33161896 (-) |
| G1615357 | LOC106602003 | other | downstream | 2945171 | 32650926 ~ 32657769 (-) |
| G1619119 | NA | other | upstream | 797660 | 36401554 ~ 36405336 (-) |
| LOC110497753 | spred1 | other | upstream | 1050629 | 36654523 ~ 36840800 (-) |
| G1622757 | LOC106600509 | other | upstream | 3353130 | 38957024 ~ 38958974 (-) |
| si:dkey-229e3.2 | LOC106599591 | other | upstream | 3761363 | 39365257 ~ 39370631 (-) |
| G1623037 | LOC106586451 | other | upstream | 3792174 | 39396068 ~ 39411784 (-) |
