G1618186


Basic Information

Item Value
gene id G1618186
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 35706123 ~ 35706815 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1851783
agagctggcagcccagccaaactgagcaattgggggagaagggccactCCAccgtaaaaggcacattacagcctgcttggagtttgccaaaaggcacctaaaggattctcagatcatgagaaacaagattctctggtctgatgaaaccaaaattgaactctttgtcctgaatgccaagcgccacgtctggaggaaacctggcaccatccctacggtgaagcatggtggtggtagcatcatgctgtgggaaggttttcagcggcagggactggagactagtcaggatcgagggaatgatgaacggagcaaagtacagagagttccttgatgaaaacctgctccagagtgctcaggatcttagactggggtgaaggttcacgttccaacatgacaacaaccctaagcacacagccaagacaacacaggagtggcattgggacaagtctctgaatgtccttaagtgtcccagccagagcctggacttgatcccgatctaacatctctggagaaacctaaaaaccaacctgaccgagcttgagaggatctgcagagaagaatgggagaaactccccaaatacaagtgtgccacgcttgtagcgtcatacccaagatgacttgaagctgtaatcgctaccaaaggtgcttacgcaaagtactgagtagagggtctgaatacttatgtaaatgtgatat

Function

NR:

description
PREDICTED: zinc finger protein 135-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1851783 True 693 lncRNA 0.49 1 35706123 35706815

Neighbor

gene id symbol gene type direction distance location
LOC110497733 LOC106601249 coding downstream 2405 35689469 ~ 35703718 (-)
LOC110497737 LOC103380713 coding downstream 44278 35647704 ~ 35661845 (-)
ralgapa1 ralgapa1 coding downstream 167361 35460212 ~ 35538762 (-)
LOC110497729 LOC106601178 coding downstream 264236 35439126 ~ 35441887 (-)
LOC110498336 LOC106611177 coding downstream 310803 35392412 ~ 35396783 (-)
zgc:174356 LOC106601284 coding upstream 188797 35895612 ~ 35935389 (-)
LOC110497741 LOC106601320 coding upstream 518412 36225227 ~ 36237234 (-)
ccdc88c LOC106601343 coding upstream 533965 36240780 ~ 36323039 (-)
il17a/f1 LOC106600843 coding upstream 661971 36368786 ~ 36370367 (-)
LOC110497747 LOC106601376 coding upstream 708911 36415726 ~ 36419930 (-)
G1618184 NA non-coding downstream 784 35705043 ~ 35705339 (-)
G1618163 NA non-coding downstream 59775 35646123 ~ 35646348 (-)
G1618162 NA non-coding downstream 60112 35645788 ~ 35646011 (-)
G1618137 NA non-coding downstream 94647 35611177 ~ 35611476 (-)
G1618105 LOC106601235 non-coding downstream 95601 35546000 ~ 35610522 (-)
G1618193 NA non-coding upstream 7794 35714609 ~ 35714857 (-)
G1618197 NA non-coding upstream 11739 35718554 ~ 35718821 (-)
G1618198 NA non-coding upstream 12305 35719120 ~ 35719348 (-)
G1618199 NA non-coding upstream 12681 35719496 ~ 35719723 (-)
G1618209 NA non-coding upstream 18157 35724972 ~ 35725327 (-)
G1615810 hectd1 other downstream 2226687 33478593 ~ 33479436 (-)
G1615793 NA other downstream 2292906 33412219 ~ 33413217 (-)
LOC110497688 npas3 other downstream 2930419 32770921 ~ 33161896 (-)
G1615357 LOC106602003 other downstream 3048354 32650926 ~ 32657769 (-)
G1619119 NA other upstream 694739 36401554 ~ 36405336 (-)
LOC110497753 spred1 other upstream 947708 36654523 ~ 36840800 (-)
G1622757 LOC106600509 other upstream 3250209 38957024 ~ 38958974 (-)
si:dkey-229e3.2 LOC106599591 other upstream 3658442 39365257 ~ 39370631 (-)
G1623037 LOC106586451 other upstream 3689253 39396068 ~ 39411784 (-)

Expression


Co-expression Network