Gene
RNA
| Item | Value |
|---|---|
| gene id | G1618999 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 36129226 ~ 36129895 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1852622 | True | 670 | lncRNA | 0.43 | 1 | 36129226 | 36129895 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:174356 | LOC106601284 | coding | downstream | 193837 | 35895612 ~ 35935389 (-) |
| LOC110497733 | LOC106601249 | coding | downstream | 425508 | 35689469 ~ 35703718 (-) |
| LOC110497737 | LOC103380713 | coding | downstream | 467381 | 35647704 ~ 35661845 (-) |
| ralgapa1 | ralgapa1 | coding | downstream | 590464 | 35460212 ~ 35538762 (-) |
| LOC110497729 | LOC106601178 | coding | downstream | 687339 | 35439126 ~ 35441887 (-) |
| LOC110497741 | LOC106601320 | coding | upstream | 95332 | 36225227 ~ 36237234 (-) |
| ccdc88c | LOC106601343 | coding | upstream | 110885 | 36240780 ~ 36323039 (-) |
| il17a/f1 | LOC106600843 | coding | upstream | 238891 | 36368786 ~ 36370367 (-) |
| LOC110497747 | LOC106601376 | coding | upstream | 285831 | 36415726 ~ 36419930 (-) |
| LOC110498571 | NA | coding | upstream | 461038 | 36590933 ~ 36593040 (-) |
| G1618996 | NA | non-coding | downstream | 2115 | 36126805 ~ 36127111 (-) |
| G1618985 | NA | non-coding | downstream | 6058 | 36122916 ~ 36123168 (-) |
| G1618984 | NA | non-coding | downstream | 6624 | 36121975 ~ 36122602 (-) |
| G1618982 | NA | non-coding | downstream | 10776 | 36117212 ~ 36118450 (-) |
| G1618881 | NA | non-coding | downstream | 141432 | 35987493 ~ 35987794 (-) |
| G1619000 | NA | non-coding | upstream | 565 | 36130460 ~ 36130682 (-) |
| G1619002 | NA | non-coding | upstream | 2907 | 36132802 ~ 36133031 (-) |
| G1619115 | NA | non-coding | upstream | 217679 | 36347574 ~ 36350149 (-) |
| G1619147 | NA | non-coding | upstream | 299376 | 36429271 ~ 36429510 (-) |
| LOC110498336 | LOC106611177 | other | downstream | 732443 | 35392412 ~ 35396783 (-) |
| G1615810 | hectd1 | other | downstream | 2649790 | 33478593 ~ 33479436 (-) |
| G1615793 | NA | other | downstream | 2716009 | 33412219 ~ 33413217 (-) |
| LOC110497688 | npas3 | other | downstream | 3353522 | 32770921 ~ 33161896 (-) |
| G1615357 | LOC106602003 | other | downstream | 3471457 | 32650926 ~ 32657769 (-) |
| G1619119 | NA | other | upstream | 271659 | 36401554 ~ 36405336 (-) |
| LOC110497753 | spred1 | other | upstream | 524628 | 36654523 ~ 36840800 (-) |
| G1622757 | LOC106600509 | other | upstream | 2827129 | 38957024 ~ 38958974 (-) |
| si:dkey-229e3.2 | LOC106599591 | other | upstream | 3235362 | 39365257 ~ 39370631 (-) |
| G1623037 | LOC106586451 | other | upstream | 3266173 | 39396068 ~ 39411784 (-) |
