G1619632


Basic Information

Item Value
gene id G1619632
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 36678724 ~ 36684107 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1853298
CCTTATTGATGTCCGCCAAAAGCAAATTAGTCCATTTGTAAATTGTGCATATCCAAAGCTGCCGCCAGTCATTATAGGTGATAGTTATGTCAAATATCGAAAAGGTTTAGTTTGGAATCTGCATACAGAAAACCAACTCAGCTAACGACGTGCTTCACTTCCTGCCGAAAGAGCAACAAGTGTGTATGAAGCTCTACATCCGCGGATCTATATTATCCTCTTTTTTACACAACCGTTTTCCTATTATGCTGATTTACATAGACAAACAAAACTATGAGCATTTACATTAAATATAATATTTTCTTCAGGTCCTGTATGAGTTTCAACGGTTGTATTTCTTTTTAAAAGTTTGAGTAGTTCTTCAACAGCGGCGTGATACACGGCAGATTTAGAGGCAATGACATCAGACAGCTGGAATGCCAGGCAGGGAAAATGACAAGAATGAGACAGCTGCCACCCTGCTTACGACTTATGACTCTGGAGAATGCACCTCCAACGGTTTCCTACAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1853298 True 510 lncRNA 0.40 2 36678724 36684107

Neighbor

gene id symbol gene type direction distance location
LOC110497749 LOC106601399 coding downstream 4192 36641587 ~ 36674532 (-)
LOC110498571 NA coding downstream 85684 36590933 ~ 36593040 (-)
LOC110497747 LOC106601376 coding downstream 258794 36415726 ~ 36419930 (-)
il17a/f1 LOC106600843 coding downstream 308357 36368786 ~ 36370367 (-)
ccdc88c LOC106601343 coding downstream 355685 36240780 ~ 36323039 (-)
LOC110497751 LOC106601420 coding upstream 35814 36719921 ~ 36739629 (-)
fam98b fam98b coding upstream 64746 36748853 ~ 36757484 (-)
LOC110497753 spred1 coding upstream 80598 36654523 ~ 36840800 (-)
LOC118941471 NA coding upstream 345147 37029254 ~ 37036523 (-)
cdin1 cssa01h15orf41 coding upstream 482663 37166770 ~ 37243458 (-)
G1619518 NA non-coding downstream 148553 36529893 ~ 36530171 (-)
G1619516 NA non-coding downstream 152043 36526355 ~ 36526681 (-)
G1619512 NA non-coding downstream 157377 36521093 ~ 36521347 (-)
G1619155 NA non-coding downstream 239419 36439103 ~ 36439305 (-)
G1619895 NA non-coding upstream 323435 37007542 ~ 37008012 (-)
G1619905 NA non-coding upstream 332509 37016616 ~ 37016834 (-)
G1619916 NA non-coding upstream 337321 37021428 ~ 37021726 (-)
G1619996 NA non-coding upstream 339491 37023598 ~ 37023806 (-)
G1619119 NA other downstream 273388 36401554 ~ 36405336 (-)
LOC110498336 LOC106611177 other downstream 1281941 35392412 ~ 35396783 (-)
G1615810 hectd1 other downstream 3199288 33478593 ~ 33479436 (-)
G1615793 NA other downstream 3265507 33412219 ~ 33413217 (-)
LOC110497688 npas3 other downstream 3903020 32770921 ~ 33161896 (-)
G1622757 LOC106600509 other upstream 2272917 38957024 ~ 38958974 (-)
si:dkey-229e3.2 LOC106599591 other upstream 2681150 39365257 ~ 39370631 (-)
G1623037 LOC106586451 other upstream 2711961 39396068 ~ 39411784 (-)
G1623175 NA other upstream 2991332 39675439 ~ 39681529 (-)
LOC110497838 trmt5 other upstream 3783237 40467344 ~ 40547622 (-)

Expression


Co-expression Network