G1620034


Basic Information

Item Value
gene id G1620034
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 37090057 ~ 37091448 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1853774
ccttttgcacacaatgtatatagattattttttttctactatgttactgacttgtttattgtttattgtttactccatgtgtaactctgtgttgttgtctgttcacactgctatgctttatcttggccaggtcgcagttgcaaatgagaacttgttctcaactagcctacctggttaaataaaggtgaaatactaCTCATCTACATTATCTACTCATTACGTCATCACAACTCATCTACTGATCACGTTATCACTACTCATTATCTACTCATCATGTCATCACTACTCATCTACTCATCACGTTATCACTACTCATCTACTCATCATGTTATCACTACTCATCTACTCATCACATCATCATTACTCATCACATTATCACTACTCATCTACTCATCACGTTATCATTAATCATTTACTCATCACGTTATCACTAATCCTCTACTCATCACTTTATCACTAATCATCTACTCATCACGTTATCACTAATCATCTACACAttatgttatcattactcatccGGTCATCTACTCATCACTTTGTCACTAATCATCTACTCATCACGTTACCAGTAATCATCTACTCATCATGTTATCACTAACCATCTACTCATCACGTCATCACTAATCATCTACTCATCTACTCATCACGTTATCACTACTCATCATGTTATCACTACTCATCAAATGATCACTAATCATCTACTCATCACATTATCACTAATCATCTACTCATCACGTCATCACTAATCATCTACTCATCACATTATCATTACTCATCTACTCATCACGTTATCACTAATCATCTTCTCATCACATTATCACTACTCATCACGTTATCACTACTCATCACGTTATCACTAATCATCTACTCATCACGTTATCACTACTCATCTACCCATCACGTTATCACTACTCATCTACTCATCACGTTATCGCTACTCATCACATTATCACTACTCATCTACTCATCACGTTATCACAACTCATCTACTCATCACATTATCAACACTCATATACTCATTATCTACTCATCACGTCATCACTACTCATTACTCATCATGTCATATCTACTCATCACATTATCACTACTCATCTACTCGTCACATTATCACTACTCATCACGTCATCACTACTCATCTACTCATCACGTTGTCACTATTCATCTATTCATCACATCATCACT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1853774 True 1182 lncRNA 0.36 2 37090057 37091448

Neighbor

gene id symbol gene type direction distance location
LOC118941471 NA coding downstream 53534 37029254 ~ 37036523 (-)
LOC110497753 spred1 coding downstream 249257 36654523 ~ 36840800 (-)
fam98b fam98b coding downstream 332573 36748853 ~ 36757484 (-)
LOC110497751 LOC106601420 coding downstream 350428 36719921 ~ 36739629 (-)
LOC110497749 LOC106601399 coding downstream 415525 36641587 ~ 36674532 (-)
cdin1 cssa01h15orf41 coding upstream 75322 37166770 ~ 37243458 (-)
stxbp6 LOC106601569 coding upstream 569984 37661432 ~ 37821260 (-)
LOC110497761 LOC106601584 coding upstream 743213 37834661 ~ 37916564 (-)
ddhd1a LOC106601609 coding upstream 833061 37921022 ~ 37957112 (-)
LOC110497764 NA coding upstream 868701 37960149 ~ 37982215 (-)
G1619996 NA non-coding downstream 66251 37023598 ~ 37023806 (-)
G1619916 NA non-coding downstream 68331 37021428 ~ 37021726 (-)
G1619905 NA non-coding downstream 73223 37016616 ~ 37016834 (-)
G1619895 NA non-coding downstream 82045 37007542 ~ 37008012 (-)
G1620015 NA non-coding upstream 25412 37116860 ~ 37147984 (-)
G1620003 NA non-coding upstream 48139 37139587 ~ 37142105 (-)
G1620058 NA non-coding upstream 57409 37148857 ~ 37149076 (-)
G1620079 NA non-coding upstream 71985 37163433 ~ 37163836 (-)
G1620081 NA non-coding upstream 73349 37164797 ~ 37165002 (-)
G1619119 NA other downstream 684721 36401554 ~ 36405336 (-)
LOC110498336 LOC106611177 other downstream 1693274 35392412 ~ 35396783 (-)
G1615810 hectd1 other downstream 3610621 33478593 ~ 33479436 (-)
G1615793 NA other downstream 3676840 33412219 ~ 33413217 (-)
G1622757 LOC106600509 other upstream 1865576 38957024 ~ 38958974 (-)
si:dkey-229e3.2 LOC106599591 other upstream 2273809 39365257 ~ 39370631 (-)
G1623037 LOC106586451 other upstream 2304620 39396068 ~ 39411784 (-)
G1623175 NA other upstream 2583991 39675439 ~ 39681529 (-)
LOC110497838 trmt5 other upstream 3375896 40467344 ~ 40547622 (-)

Expression


Co-expression Network