G1620079



Basic Information


Item Value
gene id G1620079
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 37163433 ~ 37163836 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1853819
ccgtttctttttatcttAAAAAAccttagtccttgccgatgacaagtatacccataacatgatgcagccaccaccatgcttgaaaatatgaagagtggtactcagtgatgtgctggatttgccccaaaaatAAAGTTTTGTATTCAGGTTCCAAGTATCCAAGtttatttctttgccacattatttgcagtattacttaagtgccttgttgcaaacaggaggaatgttttggaatatttttattctgtacaggcttccttttcactctgtcatttagattagtattgtggagtcactacaatgttgttgattcatcctcagttttctcctatcacaaccattaaactctgtaactgttttaaagttgcCATTGGCCTCGATTAAATCCTTGTGCGGTTCCCTTC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1853819 True 404 lncRNA 0.37 1 37163433 37163836

Neighbor


gene id symbol gene type direction distance location
LOC118941471 NA coding downstream 126910 37029254 ~ 37036523 (-)
LOC110497753 spred1 coding downstream 322633 36654523 ~ 36840800 (-)
fam98b fam98b coding downstream 405949 36748853 ~ 36757484 (-)
LOC110497751 LOC106601420 coding downstream 423804 36719921 ~ 36739629 (-)
LOC110497749 LOC106601399 coding downstream 488901 36641587 ~ 36674532 (-)
cdin1 cssa01h15orf41 coding upstream 2934 37166770 ~ 37243458 (-)
stxbp6 LOC106601569 coding upstream 497596 37661432 ~ 37821260 (-)
LOC110497761 LOC106601584 coding upstream 670825 37834661 ~ 37916564 (-)
ddhd1a LOC106601609 coding upstream 760673 37921022 ~ 37957112 (-)
LOC110497764 NA coding upstream 796313 37960149 ~ 37982215 (-)
G1620058 NA non-coding downstream 14357 37148857 ~ 37149076 (-)
G1620015 NA non-coding downstream 15449 37116860 ~ 37147984 (-)
G1620003 NA non-coding downstream 21328 37139587 ~ 37142105 (-)
G1620034 NA non-coding downstream 71985 37090057 ~ 37091448 (-)
G1619996 NA non-coding downstream 139627 37023598 ~ 37023806 (-)
G1620081 NA non-coding upstream 961 37164797 ~ 37165002 (-)
G1620150 NA non-coding upstream 6927 37170763 ~ 37171165 (-)
G1620189 NA non-coding upstream 56586 37220422 ~ 37222552 (-)
G1620509 NA non-coding upstream 339499 37503335 ~ 37516479 (-)
G1620563 NA non-coding upstream 343493 37507329 ~ 37509070 (-)
G1619119 NA other downstream 758097 36401554 ~ 36405336 (-)
LOC110498336 LOC106611177 other downstream 1766650 35392412 ~ 35396783 (-)
G1615810 hectd1 other downstream 3683997 33478593 ~ 33479436 (-)
G1615793 NA other downstream 3750216 33412219 ~ 33413217 (-)
G1622757 LOC106600509 other upstream 1793188 38957024 ~ 38958974 (-)
si:dkey-229e3.2 LOC106599591 other upstream 2201421 39365257 ~ 39370631 (-)
G1623037 LOC106586451 other upstream 2232232 39396068 ~ 39411784 (-)
G1623175 NA other upstream 2511603 39675439 ~ 39681529 (-)
LOC110497838 trmt5 other upstream 3303508 40467344 ~ 40547622 (-)

Expression



Co-expression Network