G1620877



Basic Information


Item Value
gene id G1620877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 37610811 ~ 37616855 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1854719
cgcaaaccgtagtctggcttttatatggcggttttggagcagtggcttcttcctttgtcgatataggacttgttttactgtggatatagatacttttgtaactgtttcctccagcatcttcacaaggtcctttgctgttgttctgggattgatttgcacttttcgcaccaaagtatgttaatctctaggagacagaacgcgtctccttcctgagcggtatgacggctgcgctgtcccatggtttttatacttgcgtactattgtttgtacagatgaacgtggtac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1854719 True 285 lncRNA 0.44 2 37610811 37616855

Neighbor


gene id symbol gene type direction distance location
cdin1 cssa01h15orf41 coding downstream 367353 37166770 ~ 37243458 (-)
LOC118941471 NA coding downstream 574288 37029254 ~ 37036523 (-)
LOC110497753 spred1 coding downstream 770011 36654523 ~ 36840800 (-)
fam98b fam98b coding downstream 853327 36748853 ~ 36757484 (-)
LOC110497751 LOC106601420 coding downstream 871182 36719921 ~ 36739629 (-)
stxbp6 LOC106601569 coding upstream 44577 37661432 ~ 37821260 (-)
LOC110497761 LOC106601584 coding upstream 217806 37834661 ~ 37916564 (-)
ddhd1a LOC106601609 coding upstream 307654 37921022 ~ 37957112 (-)
LOC110497764 NA coding upstream 343294 37960149 ~ 37982215 (-)
LOC110497772 LOC106600726 coding upstream 718504 38335359 ~ 38341245 (-)
G1620506 NA non-coding downstream 50721 37557335 ~ 37560090 (-)
G1620509 NA non-coding downstream 94332 37503335 ~ 37516479 (-)
G1620507 NA non-coding downstream 99579 37507643 ~ 37511232 (-)
G1620563 NA non-coding downstream 101741 37507329 ~ 37509070 (-)
G1620189 NA non-coding downstream 388259 37220422 ~ 37222552 (-)
G1621375 NA non-coding upstream 436945 38053800 ~ 38056867 (-)
G1621386 NA non-coding upstream 444357 38061212 ~ 38061426 (-)
G1619119 NA other downstream 1205475 36401554 ~ 36405336 (-)
LOC110498336 LOC106611177 other downstream 2214028 35392412 ~ 35396783 (-)
G1615810 hectd1 other downstream 4131375 33478593 ~ 33479436 (-)
G1615793 NA other downstream 4197594 33412219 ~ 33413217 (-)
G1622757 LOC106600509 other upstream 1340169 38957024 ~ 38958974 (-)
si:dkey-229e3.2 LOC106599591 other upstream 1748402 39365257 ~ 39370631 (-)
G1623037 LOC106586451 other upstream 1779213 39396068 ~ 39411784 (-)
G1623175 NA other upstream 2058584 39675439 ~ 39681529 (-)
LOC110497838 trmt5 other upstream 2850489 40467344 ~ 40547622 (-)

Expression



Co-expression Network