Gene
RNA
| Item | Value |
|---|---|
| gene id | G1622772 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 38927707 ~ 38928311 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1856873 | True | 605 | lncRNA | 0.51 | 1 | 38927707 | 38928311 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497791 | LOC106600514 | coding | downstream | 796 | 38911281 ~ 38926911 (-) |
| LOC110497790 | gnpi | coding | downstream | 28886 | 38892389 ~ 38898821 (-) |
| LOC110497787 | LOC106600539 | coding | downstream | 165547 | 38709218 ~ 38762160 (-) |
| LOC110497783 | LOC106600563 | coding | downstream | 253460 | 38654186 ~ 38674247 (-) |
| dapp1 | dapp1 | coding | downstream | 273674 | 38645382 ~ 38654033 (-) |
| lrit3b | LOC106600744 | coding | upstream | 7104 | 38935354 ~ 38939611 (-) |
| ampm1 | ampm1 | coding | upstream | 57486 | 38985797 ~ 38988755 (-) |
| enpp4 | enpp4 | coding | upstream | 296379 | 39224690 ~ 39231092 (-) |
| cdc5l | LOC106599718 | coding | upstream | 313887 | 39242198 ~ 39263880 (-) |
| LOC110498575 | LOC106599699 | coding | upstream | 347932 | 39276243 ~ 39278434 (-) |
| G1622771 | NA | non-coding | downstream | 84 | 38927407 ~ 38927623 (-) |
| G1622764 | NA | non-coding | downstream | 16481 | 38910945 ~ 38911226 (-) |
| G1622763 | NA | non-coding | downstream | 17137 | 38910282 ~ 38910570 (-) |
| G1622673 | LOC106600519 | non-coding | downstream | 77367 | 38846752 ~ 38850340 (-) |
| G1622712 | LOC106600528 | non-coding | downstream | 97317 | 38827895 ~ 38830390 (-) |
| G1622775 | NA | non-coding | upstream | 2990 | 38931301 ~ 38932352 (-) |
| G1622784 | NA | non-coding | upstream | 75519 | 39003830 ~ 39005396 (-) |
| G1622892 | NA | non-coding | upstream | 243397 | 39171708 ~ 39171949 (-) |
| G1622914 | LOC100380701 | non-coding | upstream | 267176 | 39195487 ~ 39196095 (-) |
| LOC110497753 | spred1 | other | downstream | 2159008 | 36654523 ~ 36840800 (-) |
| G1619119 | NA | other | downstream | 2522371 | 36401554 ~ 36405336 (-) |
| LOC110498336 | LOC106611177 | other | downstream | 3530924 | 35392412 ~ 35396783 (-) |
| G1615810 | hectd1 | other | downstream | 5448271 | 33478593 ~ 33479436 (-) |
| G1615793 | NA | other | downstream | 5514490 | 33412219 ~ 33413217 (-) |
| G1622757 | LOC106600509 | other | upstream | 28713 | 38957024 ~ 38958974 (-) |
| si:dkey-229e3.2 | LOC106599591 | other | upstream | 436946 | 39365257 ~ 39370631 (-) |
| G1623037 | LOC106586451 | other | upstream | 467757 | 39396068 ~ 39411784 (-) |
| G1623175 | NA | other | upstream | 747128 | 39675439 ~ 39681529 (-) |
| LOC110497838 | trmt5 | other | upstream | 1539033 | 40467344 ~ 40547622 (-) |
