G1622757 (LOC106600509)


Basic Information

Item Value
gene id G1622757
gene name LOC106600509
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 38957024 ~ 38958974 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1856858
TGAAGCAGTGCTTTTATTACCTGTAATCAGACCTGTACTTTTTTATTTGTTATATTCTGAAACACATTTCGCTTTAATTTTCTATGTGATCAGGTTCCCATTCCCGGTCAGTGTGTGCCGCTCTGCAGTATGCTTGTGATCACATGCAGTGTGTGTCACCTCACCACTttgatgtttgtgtgtttgaTCCAGGCTGCTTCTGTCACTTTTCATCTGTGTGAGTCTGATGCAGTCATTGAAGTGACACAAATTGCCTGTATCTTTATCACTCTGTGGTTTTTAGTCAATGTTCTGATAGCAGCAATGTGTTATAAATATCTTTCATGCCAGAATCAATCCTACTCTATTTCAATCACATATATTTATAATTATCTAACTATAGAATATCATCAAATGTAGGGACAAGCTGATCCCCAACAATATTATTACAAATAACTACACTGTCTgattttaaaaaaacaagaaagaaacaaCTGGGTCACTCCTTGACAAACACAATCACGACAATAAGTATCATAACAGACTAACCCGGAGAAGCATGTAAGTGTTGTTGAAACACGTTTGTGTGGAAATGTACTCTGTttatatattaataataatgtaTGAGCACAGACATTACACTGATAAAGGGTATTGAAAGGCCCGGATACCATACTGATAAGTTATCGTCGCTCACAGCGACTTTATGTTTAGATGCGCAAACTAAGGTATGAGATAGGATAACTAATAACCGCCAATCTATTGACCTAGCATTGATTGAGCAATGGCCAAGAAGTAGGGAATGGTTTTATTCAAAACTGACACATGATAGCCAGATCTCTTTGTCAAGTGGGAGTAGGATAAAGTACAATGACTAAAGCAGAAACATAATTGGCTTCCAGGCAACATAACAAAATCAAAACATGATTATCACTGTTGTTACAATGGTTACTAGCAGCATGCCTGCAGTATGCTACCTACCATTCACCCCTACTAATACatattgtgatatagtgaatcaTTGGTTTATCAAGCCATATTGTATAGTTTTGCTCGTTGATTGCTTGAGCAGGAAAAGTAAGTGATATTGGCTGGGTTGAGTTGACCCTCTTACTGCAGTGCCACACTCAGGACTGACCGTATACTGCAAAACAAGGAGAACACAAGCATTTATTTTTCTGAACATTAAATTCAACTTCTCACAGAGACAAACAGTACTAAGGTGAAAGTTACCAGTCTCCTGTCTGCATGAGTTGGATGGCGTCGTTGACCTGGGCCAGGGTCATGTTGTGGGTGACAAACTCATCCAGCTTCACCTTCTTCTCCAGGTACTCATTCACCAGCTTGGGCACACCATCCTTACTCTTAAAAACCTCCAAACAGAGATCCTTTCCAGGTGCGGCCAGCTATGAGCTGAATGGGTCTGGCAGCAAAATCATCCATGTCAGTCCATCCGACCAGCACACTTACTCCCCATCCCTTAACACACGACTCCAAAGCACTCCTCATTACGGCCACATTCCCCACACATTCCAGGGAAAAGTCCACTCCTCCGTTGGTCATCTCATGCAGCACTTGACTGATGGGTTTGTTGTGGTCCTTGGGGTTGACAAACTCTGTGGCACCGAAGATCTTGGCCTTCTCATATTTGGTTGGGTTAATATCAATGGCGATGATCCTCTTGGCCCCAGCGTTTTTGCAGCCCATGACCGCTGCCAACCCCACAGCTCCCAGGCCAAACACAGCACATGTAGACC

Function

NR:

description
alcohol dehydrogenase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1856858 True 1736 TUCP 0.42 3 38957024 38958974

Neighbor

gene id symbol gene type direction distance location
lrit3b LOC106600744 coding downstream 17413 38935354 ~ 38939611 (-)
LOC110497791 LOC106600514 coding downstream 30113 38911281 ~ 38926911 (-)
LOC110497790 gnpi coding downstream 58203 38892389 ~ 38898821 (-)
LOC110497787 LOC106600539 coding downstream 194864 38709218 ~ 38762160 (-)
LOC110497783 LOC106600563 coding downstream 282777 38654186 ~ 38674247 (-)
ampm1 ampm1 coding upstream 26823 38985797 ~ 38988755 (-)
enpp4 enpp4 coding upstream 265716 39224690 ~ 39231092 (-)
cdc5l LOC106599718 coding upstream 283224 39242198 ~ 39263880 (-)
LOC110498575 LOC106599699 coding upstream 317269 39276243 ~ 39278434 (-)
LOC110497802 LOC105031663 coding upstream 319722 39278696 ~ 39285767 (-)
G1622775 NA non-coding downstream 24672 38931301 ~ 38932352 (-)
G1622772 NA non-coding downstream 28713 38927707 ~ 38928311 (-)
G1622771 NA non-coding downstream 29401 38927407 ~ 38927623 (-)
G1622764 NA non-coding downstream 45798 38910945 ~ 38911226 (-)
G1622784 NA non-coding upstream 44856 39003830 ~ 39005396 (-)
G1622892 NA non-coding upstream 212734 39171708 ~ 39171949 (-)
G1622914 LOC100380701 non-coding upstream 236513 39195487 ~ 39196095 (-)
G1622918 LOC106599729 non-coding upstream 246323 39205297 ~ 39207491 (-)
G1622936 NA non-coding upstream 261709 39220683 ~ 39220918 (-)
LOC110497753 spred1 other downstream 2188325 36654523 ~ 36840800 (-)
G1619119 NA other downstream 2551688 36401554 ~ 36405336 (-)
LOC110498336 LOC106611177 other downstream 3560241 35392412 ~ 35396783 (-)
G1615810 hectd1 other downstream 5477588 33478593 ~ 33479436 (-)
G1615793 NA other downstream 5543807 33412219 ~ 33413217 (-)
si:dkey-229e3.2 LOC106599591 other upstream 406283 39365257 ~ 39370631 (-)
G1623037 LOC106586451 other upstream 437094 39396068 ~ 39411784 (-)
G1623175 NA other upstream 716465 39675439 ~ 39681529 (-)
LOC110497838 trmt5 other upstream 1508370 40467344 ~ 40547622 (-)
G1624738 NA other upstream 1670791 40629765 ~ 40630208 (-)

Expression


Co-expression Network