Gene
RNA
| Item | Value |
|---|---|
| gene id | G1622987 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 39326289 ~ 39326730 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1857126 | True | 414 | lncRNA | 0.51 | 2 | 39326289 | 39326730 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497802 | LOC105031663 | coding | downstream | 40522 | 39278696 ~ 39285767 (-) |
| LOC110498575 | LOC106599699 | coding | downstream | 47855 | 39276243 ~ 39278434 (-) |
| cdc5l | LOC106599718 | coding | downstream | 62409 | 39242198 ~ 39263880 (-) |
| enpp4 | enpp4 | coding | downstream | 95197 | 39224690 ~ 39231092 (-) |
| ampm1 | ampm1 | coding | downstream | 337534 | 38985797 ~ 38988755 (-) |
| si:dkey-229e3.2 | LOC106599591 | coding | upstream | 38528 | 39365257 ~ 39370631 (-) |
| si:dkey-196h17.9 | LOC106586342 | coding | upstream | 171890 | 39498620 ~ 39503300 (-) |
| ckba | ckb | coding | upstream | 223769 | 39550499 ~ 39561200 (-) |
| LOC110497819 | bag5 | coding | upstream | 263611 | 39590341 ~ 39605843 (-) |
| LOC110497823 | LOC106599217 | coding | upstream | 362828 | 39689558 ~ 39692818 (-) |
| G1622936 | NA | non-coding | downstream | 105371 | 39220683 ~ 39220918 (-) |
| G1622918 | LOC106599729 | non-coding | downstream | 118798 | 39205297 ~ 39207491 (-) |
| G1622914 | LOC100380701 | non-coding | downstream | 130194 | 39195487 ~ 39196095 (-) |
| G1622892 | NA | non-coding | downstream | 154340 | 39171708 ~ 39171949 (-) |
| G1622784 | NA | non-coding | downstream | 320893 | 39003830 ~ 39005396 (-) |
| G1623038 | LOC106586451 | non-coding | upstream | 73510 | 39400240 ~ 39404651 (-) |
| G1623061 | eif5 | non-coding | upstream | 192247 | 39518977 ~ 39558601 (-) |
| G1623106 | LOC106610955 | non-coding | upstream | 204130 | 39530860 ~ 39531284 (-) |
| G1623130 | NA | non-coding | upstream | 247951 | 39574681 ~ 39575099 (-) |
| G1622757 | LOC106600509 | other | downstream | 367315 | 38957024 ~ 38958974 (-) |
| LOC110497753 | spred1 | other | downstream | 2557590 | 36654523 ~ 36840800 (-) |
| G1619119 | NA | other | downstream | 2920953 | 36401554 ~ 36405336 (-) |
| LOC110498336 | LOC106611177 | other | downstream | 3929506 | 35392412 ~ 35396783 (-) |
| G1615810 | hectd1 | other | downstream | 5846853 | 33478593 ~ 33479436 (-) |
| G1623037 | LOC106586451 | other | upstream | 69338 | 39396068 ~ 39411784 (-) |
| G1623175 | NA | other | upstream | 348709 | 39675439 ~ 39681529 (-) |
| LOC110497838 | trmt5 | other | upstream | 1140614 | 40467344 ~ 40547622 (-) |
| G1624738 | NA | other | upstream | 1303035 | 40629765 ~ 40630208 (-) |
