G1623061 (eif5)


Basic Information

Item Value
gene id G1623061
gene name eif5
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 39518977 ~ 39558601 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1857248
GGGAGTATGAAaatgggatattttatttcagctcatgaaaaatgggaccaacactttacatgttgcatttttgttcagtgtatatttgcCTCATCCAAGTGAAGTAGGCCTATATAATATATGCTGATGCAATATACTGAATACAAATCAGGGGGGTTAAGGAGTCACCCTGATGAGCTTCATATATTTCCGTGTTTTCTGTGCTCTCATTATTCCAAAAAGTTGTATCAATTCAAAAATATGCTGCAATGGCACTGCTGACTTGTCAAGAGGGGGAATACCACAAGTGTGTTGAGTACTGAGTGACATCCAGAGGTTATGCACAGTTTACACATACCACAGAGCTGACAATATCAATACCATCTAAAAACTCAATTGGAACAAAATAGTTGTGGACAGTAAAACATTTAATGACAAAAAAAGGGAAGAAATTCATACCAGTCAAGTAACTCCCCCAAAACTGACCCATATCTCAGATCGGATACATCTCAAAATTACAGAGGAAATGTGCATAGCGCCATGTTAATCATGCCAGGAAGCAGTGAGGGTGTGAGAAAAGGAAAGGAGGGCTGGTGATTTGACAAGATGAAAAAAATGTGATTCAAAGCTACAACTTCTCAAAAATGGCATCCTTGTTTAATTAAATTGCATCAATATCGAAGTCGTCCTCTTCCTCGTCAGGCTTGTTCGGTTTTACTGTCTCCACTTTCAGTTCCCGAGCAGAAGAATCATACACAACCTCCACATtttcatcatcctcttcctcctctacctcactgccctcactctcttcctccgCCTCCTTCAGCCACCTGATGAAAGGAGATGCCCTCGCATGGATCTCTTTGGCAAGTTCCTTAGAGACATACTTCTTGGACACCTTCTCTGCCCAGGACAGTATGACATCCTCC
>TU1857249
tatataatatatataCTGATGCAATATACTGAATACAAATCAGGGGGGTTAAGGAGTCACCCTGATGAGCTTCATATATTTCCGTGTTTTCTGTGCTCTCATTATTCCAAAAAGTTGTATCAATTCAAAAATATGCTGCAATGGCACTGCTGACTTGTCAAGAGGGGGAATACCACAAGTGTGTTGAGTACTGAGTGACATCCAGAGGTTATGCACAGTTTACACATACCACAGAGCTGACAATATCAATACCATCTAAAAACTCAATTGGAACAAAATAGTTGTGGACAGTAAAACATTTAATGACAAAAAAAGGGAAGAAATTCATACCAGTCAAGTAACTCCCCCAAAACTGACCCATATCTCAGATCGGATACATCTCAAAATTACAGAGGAAATGTGCATAGCGCCATGTTAATCATGCCAGGAAGCAGTGAGGGTGTGAGAAAAGGAAAGGAGGGCTGGTGATTTGACAAGATGAAAAAAATGTGATTCAAAGCTACAACTTCTCAAAAATGGCATCCTTGTTTAATTAAATTGCATCAATATCGAAGTCGTCCTCTTCCTCGTCAGGCTTGTTCGGTTTTACTGTCTCCACTTTCAGTTCCCGAGCAGAAGAATCATACACAACCTCCACATtttcatcatcctcttcctcctctacctcactgccctcactctcttcctccgCCTCCTTCAGCCACCTGATGAAAGGAGATGCCCTCGCATGGATCTCTTTGGCAAGTTCCTTAGAGACATACTTCTTGGACACCTGAAAGAGAGTCATGAGCAACAAGACTTAGAGAACCGAGCAAACAGAAAATTAAACATCACTTATTTTACAAGAAGCTACGTAAGTGGGACATTCAAATGTATTgaagtgtgtgcgagcaatgTACATGTTTCACCACACACCTTCTCTGCCCAGGACAGTATGACATCCTCC

Function

symbol description
eif5 Predicted to enable GDP-dissociation inhibitor activity; eukaryotic initiation factor eIF2 binding activity; and translation initiation factor activity. Predicted to be involved in formation of cytoplasmic translation initiation complex and formation of translation preinitiation complex. Predicted to act upstream of or within translational initiation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytosol. Is expressed in lens. Orthologous to human EIF5 (eukaryotic translation initiation factor 5).

NR:

description
PREDICTED: eukaryotic translation initiation factor 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1857248 False 911 lncRNA 0.41 3 39518977 39520164
TU1857249 True 946 lncRNA 0.41 3 39518977 39558601

Neighbor

gene id symbol gene type direction distance location
si:dkey-196h17.9 LOC106586342 coding downstream 15677 39498620 ~ 39503300 (-)
si:dkey-229e3.2 LOC106599591 coding downstream 148346 39365257 ~ 39370631 (-)
LOC110497802 LOC105031663 coding downstream 233210 39278696 ~ 39285767 (-)
LOC110498575 LOC106599699 coding downstream 240543 39276243 ~ 39278434 (-)
cdc5l LOC106599718 coding downstream 255097 39242198 ~ 39263880 (-)
LOC110497819 bag5 coding upstream 31740 39590341 ~ 39605843 (-)
LOC110497823 LOC106599217 coding upstream 130957 39689558 ~ 39692818 (-)
syne2b LOC106599102 coding upstream 396525 39955126 ~ 40097979 (-)
kcnh5b LOC106599078 coding upstream 553115 40111716 ~ 40194268 (-)
LOC110497830 LOC106599033 coding upstream 643155 40201756 ~ 40235731 (-)
G1623038 LOC106586451 non-coding downstream 114326 39400240 ~ 39404651 (-)
G1622987 NA non-coding downstream 192247 39326289 ~ 39326730 (-)
G1622936 NA non-coding downstream 298059 39220683 ~ 39220918 (-)
G1622918 LOC106599729 non-coding downstream 311486 39205297 ~ 39207491 (-)
G1623130 NA non-coding upstream 16080 39574681 ~ 39575099 (-)
G1623129 NA non-coding upstream 93130 39651731 ~ 39652207 (-)
G1623128 NA non-coding upstream 96068 39654669 ~ 39656645 (-)
G1623154 NA non-coding upstream 108954 39667555 ~ 39670662 (-)
G1623175 NA non-coding upstream 116838 39675439 ~ 39681529 (-)
G1623037 LOC106586451 other downstream 107193 39396068 ~ 39411784 (-)
G1622757 LOC106600509 other downstream 560003 38957024 ~ 38958974 (-)
LOC110497753 spred1 other downstream 2750278 36654523 ~ 36840800 (-)
G1619119 NA other downstream 3113641 36401554 ~ 36405336 (-)
LOC110497838 trmt5 other upstream 908743 40467344 ~ 40547622 (-)
G1624738 NA other upstream 1071164 40629765 ~ 40630208 (-)
G1624737 NA other upstream 1071977 40630578 ~ 40631738 (-)
LOC110498350 NA other upstream 1136874 40689096 ~ 40699267 (-)

Expression


Co-expression Network