Gene
RNA
| Item | Value |
|---|---|
| gene id | G1623106 |
| gene name | LOC106610955 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 39530860 ~ 39531284 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein Z043_125421, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1857312 | True | 369 | lncRNA | 0.45 | 2 | 39530860 | 39531284 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-196h17.9 | LOC106586342 | coding | downstream | 27560 | 39498620 ~ 39503300 (-) |
| si:dkey-229e3.2 | LOC106599591 | coding | downstream | 160229 | 39365257 ~ 39370631 (-) |
| LOC110497802 | LOC105031663 | coding | downstream | 245093 | 39278696 ~ 39285767 (-) |
| LOC110498575 | LOC106599699 | coding | downstream | 252426 | 39276243 ~ 39278434 (-) |
| cdc5l | LOC106599718 | coding | downstream | 266980 | 39242198 ~ 39263880 (-) |
| ckba | ckb | coding | upstream | 19215 | 39550499 ~ 39561200 (-) |
| LOC110497819 | bag5 | coding | upstream | 59057 | 39590341 ~ 39605843 (-) |
| LOC110497823 | LOC106599217 | coding | upstream | 158274 | 39689558 ~ 39692818 (-) |
| syne2b | LOC106599102 | coding | upstream | 423842 | 39955126 ~ 40097979 (-) |
| kcnh5b | LOC106599078 | coding | upstream | 580432 | 40111716 ~ 40194268 (-) |
| G1623038 | LOC106586451 | non-coding | downstream | 126209 | 39400240 ~ 39404651 (-) |
| G1622987 | NA | non-coding | downstream | 204130 | 39326289 ~ 39326730 (-) |
| G1622936 | NA | non-coding | downstream | 309942 | 39220683 ~ 39220918 (-) |
| G1622918 | LOC106599729 | non-coding | downstream | 323369 | 39205297 ~ 39207491 (-) |
| G1623130 | NA | non-coding | upstream | 43397 | 39574681 ~ 39575099 (-) |
| G1623129 | NA | non-coding | upstream | 120447 | 39651731 ~ 39652207 (-) |
| G1623128 | NA | non-coding | upstream | 123385 | 39654669 ~ 39656645 (-) |
| G1623154 | NA | non-coding | upstream | 136271 | 39667555 ~ 39670662 (-) |
| G1623175 | NA | non-coding | upstream | 144155 | 39675439 ~ 39681529 (-) |
| G1623037 | LOC106586451 | other | downstream | 119076 | 39396068 ~ 39411784 (-) |
| G1622757 | LOC106600509 | other | downstream | 571886 | 38957024 ~ 38958974 (-) |
| LOC110497753 | spred1 | other | downstream | 2762161 | 36654523 ~ 36840800 (-) |
| G1619119 | NA | other | downstream | 3125524 | 36401554 ~ 36405336 (-) |
| LOC110497838 | trmt5 | other | upstream | 936060 | 40467344 ~ 40547622 (-) |
| G1624738 | NA | other | upstream | 1098481 | 40629765 ~ 40630208 (-) |
| G1624737 | NA | other | upstream | 1099294 | 40630578 ~ 40631738 (-) |
| LOC110498350 | NA | other | upstream | 1164191 | 40689096 ~ 40699267 (-) |
