Gene
RNA
| Item | Value |
|---|---|
| gene id | G1623334 |
| gene name | erb2 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 39919331 ~ 39943494 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| estrogen receptor beta 2 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1857604 | True | 1233 | lncRNA | 0.52 | 2 | 39919331 | 39943494 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497823 | LOC106599217 | coding | downstream | 226513 | 39689558 ~ 39692818 (-) |
| LOC110497819 | bag5 | coding | downstream | 313488 | 39590341 ~ 39605843 (-) |
| ckba | ckb | coding | downstream | 358131 | 39550499 ~ 39561200 (-) |
| si:dkey-196h17.9 | LOC106586342 | coding | downstream | 416031 | 39498620 ~ 39503300 (-) |
| si:dkey-229e3.2 | LOC106599591 | coding | downstream | 548700 | 39365257 ~ 39370631 (-) |
| syne2b | LOC106599102 | coding | upstream | 11632 | 39955126 ~ 40097979 (-) |
| kcnh5b | LOC106599078 | coding | upstream | 168222 | 40111716 ~ 40194268 (-) |
| LOC110497830 | LOC106599033 | coding | upstream | 258262 | 40201756 ~ 40235731 (-) |
| LOC118941474 | NA | coding | upstream | 282471 | 40225965 ~ 40229000 (-) |
| LOC110497831 | sgpp1 | coding | upstream | 351073 | 40294567 ~ 40312562 (-) |
| G1623221 | NA | non-coding | downstream | 173532 | 39745448 ~ 39745799 (-) |
| G1623217 | NA | non-coding | downstream | 177066 | 39742038 ~ 39742265 (-) |
| G1623215 | NA | non-coding | downstream | 178892 | 39740141 ~ 39740439 (-) |
| G1623181 | NA | non-coding | downstream | 237335 | 39681050 ~ 39681996 (-) |
| G1623175 | NA | non-coding | downstream | 243561 | 39675439 ~ 39681529 (-) |
| G1623414 | NA | non-coding | upstream | 207102 | 40150596 ~ 40150805 (-) |
| G1623418 | NA | non-coding | upstream | 209203 | 40152697 ~ 40152977 (-) |
| G1623420 | NA | non-coding | upstream | 211152 | 40154646 ~ 40154902 (-) |
| G1623422 | NA | non-coding | upstream | 212495 | 40155989 ~ 40156228 (-) |
| G1623424 | NA | non-coding | upstream | 215912 | 40159406 ~ 40159827 (-) |
| G1623037 | LOC106586451 | other | downstream | 507547 | 39396068 ~ 39411784 (-) |
| G1622757 | LOC106600509 | other | downstream | 960357 | 38957024 ~ 38958974 (-) |
| LOC110497753 | spred1 | other | downstream | 3150632 | 36654523 ~ 36840800 (-) |
| LOC110497838 | trmt5 | other | upstream | 523850 | 40467344 ~ 40547622 (-) |
| G1624738 | NA | other | upstream | 686271 | 40629765 ~ 40630208 (-) |
| G1624737 | NA | other | upstream | 687084 | 40630578 ~ 40631738 (-) |
| LOC110498350 | NA | other | upstream | 751981 | 40689096 ~ 40699267 (-) |
| LOC110497863 | LOC106596965 | other | upstream | 1126269 | 41052866 ~ 41080347 (-) |
