Gene
RNA
| Item | Value |
|---|---|
| gene id | G1622385 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 39949007 ~ 39950257 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1856428 | True | 1222 | lncRNA | 0.38 | 2 | 39949007 | 39950257 |
39,946,800
39,947,200
39,947,600
39,948,000
39,948,400
39,948,800
39,949,200
39,949,600
39,950,000
39,950,000
39,950,400
39,950,800
39,951,200
39,951,600
39,952,000
39,952,400
39,952,800
39,953,200
NC_048583.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497825 | LOC106599208 | coding | upstream | 102765 | 39820210 ~ 39846242 (+) |
| LOC118941473 | NA | coding | upstream | 157973 | 39786957 ~ 39791034 (+) |
| LOC110497824 | LOC106610962 | coding | upstream | 218847 | 39674038 ~ 39730168 (+) |
| LOC110497822 | zfyve21 | coding | upstream | 280573 | 39661600 ~ 39668434 (+) |
| LOC110497818 | NA | coding | upstream | 292326 | 39615310 ~ 39656681 (+) |
| LOC110498349 | gphb5 | coding | downstream | 149478 | 40099735 ~ 40102391 (+) |
| LOC110497836 | trmt5 | coding | downstream | 515650 | 40465907 ~ 40468723 (+) |
| LOC110497840 | LOC106598809 | coding | downstream | 594659 | 40544916 ~ 40553190 (+) |
| LOC110497841 | LOC106598867 | coding | downstream | 609022 | 40559279 ~ 40562442 (+) |
| LOC110497848 | rtn1 | coding | downstream | 757344 | 40707601 ~ 40757224 (+) |
| G1622311 | NA | non-coding | upstream | 83039 | 39784926 ~ 39865968 (+) |
| G1622281 | NA | non-coding | upstream | 201798 | 39747000 ~ 39747209 (+) |
| G1622424 | NA | non-coding | downstream | 63915 | 40014172 ~ 40015029 (+) |
| G1622432 | LOC106599102 | non-coding | downstream | 78361 | 40028618 ~ 40029108 (+) |
| G1622452 | LOC106599102 | non-coding | downstream | 101682 | 40051939 ~ 40062341 (+) |
| G1622519 | NA | non-coding | downstream | 205634 | 40155891 ~ 40156143 (+) |
| G1622524 | NA | non-coding | downstream | 212963 | 40163220 ~ 40163763 (+) |
| G1622047 | LOC106599718 | other | upstream | 685117 | 39242203 ~ 39263890 (+) |
| G1621935 | NA | other | upstream | 928479 | 38992643 ~ 39020528 (+) |
| G1621909 | NA | other | upstream | 1019824 | 38928586 ~ 38929183 (+) |
| commd8 | LOC106600549 | other | upstream | 1245492 | 38686057 ~ 38703559 (+) |
| G1621360 | NA | other | upstream | 1432227 | 38515673 ~ 38516780 (+) |
| plk4 | LOC106597351 | other | downstream | 1033840 | 40984051 ~ 40993783 (+) |
| G1624239 | NA | other | downstream | 1494264 | 41444521 ~ 41446361 (+) |
| G1624560 | NA | other | downstream | 2059704 | 42009961 ~ 42010330 (+) |
| tmem260 | LOC106593970 | other | downstream | 2074351 | 41988770 ~ 42029506 (+) |
