Gene
RNA
| Item | Value |
|---|---|
| gene id | G1623424 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 40159406 ~ 40159827 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1857700 | True | 422 | lncRNA | 0.45 | 1 | 40159406 | 40159827 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| syne2b | LOC106599102 | coding | downstream | 61427 | 39955126 ~ 40097979 (-) |
| LOC110497823 | LOC106599217 | coding | downstream | 466588 | 39689558 ~ 39692818 (-) |
| LOC110497819 | bag5 | coding | downstream | 553563 | 39590341 ~ 39605843 (-) |
| ckba | ckb | coding | downstream | 598206 | 39550499 ~ 39561200 (-) |
| si:dkey-196h17.9 | LOC106586342 | coding | downstream | 656106 | 39498620 ~ 39503300 (-) |
| LOC110497830 | LOC106599033 | coding | upstream | 41929 | 40201756 ~ 40235731 (-) |
| LOC118941474 | NA | coding | upstream | 66138 | 40225965 ~ 40229000 (-) |
| LOC110497831 | sgpp1 | coding | upstream | 134740 | 40294567 ~ 40312562 (-) |
| LOC110497832 | NA | coding | upstream | 153149 | 40312976 ~ 40316713 (-) |
| syt16 | syt16 | coding | upstream | 157477 | 40317304 ~ 40341212 (-) |
| G1623422 | NA | non-coding | downstream | 3178 | 40155989 ~ 40156228 (-) |
| G1623420 | NA | non-coding | downstream | 4504 | 40154646 ~ 40154902 (-) |
| G1623418 | NA | non-coding | downstream | 6429 | 40152697 ~ 40152977 (-) |
| G1623414 | NA | non-coding | downstream | 8601 | 40150596 ~ 40150805 (-) |
| G1623301 | NA | non-coding | downstream | 210507 | 39892559 ~ 39948899 (-) |
| G1623427 | NA | non-coding | upstream | 3816 | 40163643 ~ 40163854 (-) |
| G1623431 | NA | non-coding | upstream | 13854 | 40173681 ~ 40173957 (-) |
| G1623434 | NA | non-coding | upstream | 16918 | 40176745 ~ 40177093 (-) |
| G1623440 | NA | non-coding | upstream | 25171 | 40184998 ~ 40185222 (-) |
| G1623442 | NA | non-coding | upstream | 29146 | 40188973 ~ 40189254 (-) |
| G1623175 | NA | other | downstream | 477877 | 39675439 ~ 39681529 (-) |
| G1623037 | LOC106586451 | other | downstream | 747622 | 39396068 ~ 39411784 (-) |
| si:dkey-229e3.2 | LOC106599591 | other | downstream | 789140 | 39365257 ~ 39370631 (-) |
| G1622757 | LOC106600509 | other | downstream | 1200432 | 38957024 ~ 38958974 (-) |
| LOC110497753 | spred1 | other | downstream | 3390707 | 36654523 ~ 36840800 (-) |
| LOC110497838 | trmt5 | other | upstream | 307517 | 40467344 ~ 40547622 (-) |
| G1624738 | NA | other | upstream | 469938 | 40629765 ~ 40630208 (-) |
| G1624737 | NA | other | upstream | 470751 | 40630578 ~ 40631738 (-) |
| LOC110498350 | NA | other | upstream | 535648 | 40689096 ~ 40699267 (-) |
| LOC110497863 | LOC106596965 | other | upstream | 909936 | 41052866 ~ 41080347 (-) |
