Gene
RNA
| Item | Value |
|---|---|
| gene id | G1623431 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 40173681 ~ 40173957 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1857707 | True | 277 | lncRNA | 0.43 | 1 | 40173681 | 40173957 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| syne2b | LOC106599102 | coding | downstream | 75702 | 39955126 ~ 40097979 (-) |
| LOC110497823 | LOC106599217 | coding | downstream | 480863 | 39689558 ~ 39692818 (-) |
| LOC110497819 | bag5 | coding | downstream | 567838 | 39590341 ~ 39605843 (-) |
| ckba | ckb | coding | downstream | 612481 | 39550499 ~ 39561200 (-) |
| si:dkey-196h17.9 | LOC106586342 | coding | downstream | 670381 | 39498620 ~ 39503300 (-) |
| LOC110497830 | LOC106599033 | coding | upstream | 27799 | 40201756 ~ 40235731 (-) |
| LOC118941474 | NA | coding | upstream | 52008 | 40225965 ~ 40229000 (-) |
| LOC110497831 | sgpp1 | coding | upstream | 120610 | 40294567 ~ 40312562 (-) |
| LOC110497832 | NA | coding | upstream | 139019 | 40312976 ~ 40316713 (-) |
| syt16 | syt16 | coding | upstream | 143347 | 40317304 ~ 40341212 (-) |
| G1623427 | NA | non-coding | downstream | 9827 | 40163643 ~ 40163854 (-) |
| G1623424 | NA | non-coding | downstream | 13854 | 40159406 ~ 40159827 (-) |
| G1623422 | NA | non-coding | downstream | 17453 | 40155989 ~ 40156228 (-) |
| G1623420 | NA | non-coding | downstream | 18779 | 40154646 ~ 40154902 (-) |
| G1623418 | NA | non-coding | downstream | 20704 | 40152697 ~ 40152977 (-) |
| G1623434 | NA | non-coding | upstream | 2788 | 40176745 ~ 40177093 (-) |
| G1623440 | NA | non-coding | upstream | 11041 | 40184998 ~ 40185222 (-) |
| G1623442 | NA | non-coding | upstream | 15016 | 40188973 ~ 40189254 (-) |
| G1623454 | NA | non-coding | upstream | 23679 | 40197636 ~ 40199429 (-) |
| G1623533 | NA | non-coding | upstream | 92995 | 40266952 ~ 40267223 (-) |
| G1623175 | NA | other | downstream | 492152 | 39675439 ~ 39681529 (-) |
| G1623037 | LOC106586451 | other | downstream | 761897 | 39396068 ~ 39411784 (-) |
| si:dkey-229e3.2 | LOC106599591 | other | downstream | 803415 | 39365257 ~ 39370631 (-) |
| G1622757 | LOC106600509 | other | downstream | 1214707 | 38957024 ~ 38958974 (-) |
| LOC110497753 | spred1 | other | downstream | 3404982 | 36654523 ~ 36840800 (-) |
| LOC110497838 | trmt5 | other | upstream | 293387 | 40467344 ~ 40547622 (-) |
| G1624738 | NA | other | upstream | 455808 | 40629765 ~ 40630208 (-) |
| G1624737 | NA | other | upstream | 456621 | 40630578 ~ 40631738 (-) |
| LOC110498350 | NA | other | upstream | 521518 | 40689096 ~ 40699267 (-) |
| LOC110497863 | LOC106596965 | other | upstream | 895806 | 41052866 ~ 41080347 (-) |
