Gene
RNA
| Item | Value |
|---|---|
| gene id | G1623533 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 40266952 ~ 40267223 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1857812 | True | 272 | lncRNA | 0.38 | 1 | 40266952 | 40267223 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497830 | LOC106599033 | coding | downstream | 31221 | 40201756 ~ 40235731 (-) |
| LOC118941474 | NA | coding | downstream | 37952 | 40225965 ~ 40229000 (-) |
| kcnh5b | LOC106599078 | coding | downstream | 72684 | 40111716 ~ 40194268 (-) |
| syne2b | LOC106599102 | coding | downstream | 168973 | 39955126 ~ 40097979 (-) |
| LOC110497823 | LOC106599217 | coding | downstream | 574134 | 39689558 ~ 39692818 (-) |
| LOC110497831 | sgpp1 | coding | upstream | 27344 | 40294567 ~ 40312562 (-) |
| LOC110497832 | NA | coding | upstream | 45753 | 40312976 ~ 40316713 (-) |
| syt16 | syt16 | coding | upstream | 50081 | 40317304 ~ 40341212 (-) |
| snapc1b | LOC106598946 | coding | upstream | 75133 | 40342356 ~ 40349828 (-) |
| hif1a | hif-1a | coding | upstream | 86653 | 40353876 ~ 40375782 (-) |
| G1623454 | NA | non-coding | downstream | 67523 | 40197636 ~ 40199429 (-) |
| G1623442 | NA | non-coding | downstream | 77698 | 40188973 ~ 40189254 (-) |
| G1623440 | NA | non-coding | downstream | 81730 | 40184998 ~ 40185222 (-) |
| G1623434 | NA | non-coding | downstream | 89859 | 40176745 ~ 40177093 (-) |
| G1623431 | NA | non-coding | downstream | 92995 | 40173681 ~ 40173957 (-) |
| G1623534 | NA | non-coding | upstream | 816 | 40268039 ~ 40268290 (-) |
| G1623540 | NA | non-coding | upstream | 3128 | 40270351 ~ 40270632 (-) |
| G1623572 | NA | non-coding | upstream | 15716 | 40282939 ~ 40283952 (-) |
| G1624649 | NA | non-coding | upstream | 122105 | 40389328 ~ 40390006 (-) |
| G1623175 | NA | other | downstream | 585423 | 39675439 ~ 39681529 (-) |
| G1623037 | LOC106586451 | other | downstream | 855168 | 39396068 ~ 39411784 (-) |
| si:dkey-229e3.2 | LOC106599591 | other | downstream | 896686 | 39365257 ~ 39370631 (-) |
| G1622757 | LOC106600509 | other | downstream | 1307978 | 38957024 ~ 38958974 (-) |
| LOC110497753 | spred1 | other | downstream | 3498253 | 36654523 ~ 36840800 (-) |
| LOC110497838 | trmt5 | other | upstream | 200121 | 40467344 ~ 40547622 (-) |
| G1624738 | NA | other | upstream | 362542 | 40629765 ~ 40630208 (-) |
| G1624737 | NA | other | upstream | 363355 | 40630578 ~ 40631738 (-) |
| LOC110498350 | NA | other | upstream | 428252 | 40689096 ~ 40699267 (-) |
| LOC110497863 | LOC106596965 | other | upstream | 802540 | 41052866 ~ 41080347 (-) |
