Gene
RNA
| Item | Value |
|---|---|
| gene id | G1623544 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 40273535 ~ 40273764 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1857823 | True | 230 | lncRNA | 0.44 | 1 | 40273535 | 40273764 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498349 | gphb5 | coding | upstream | 171144 | 40099735 ~ 40102391 (+) |
| erb2 | erb2 | coding | upstream | 317230 | 39919737 ~ 39956305 (+) |
| LOC110497825 | LOC106599208 | coding | upstream | 427293 | 39820210 ~ 39846242 (+) |
| LOC118941473 | NA | coding | upstream | 482501 | 39786957 ~ 39791034 (+) |
| LOC110497824 | LOC106610962 | coding | upstream | 543375 | 39674038 ~ 39730168 (+) |
| LOC110497836 | trmt5 | coding | downstream | 192143 | 40465907 ~ 40468723 (+) |
| LOC110497840 | LOC106598809 | coding | downstream | 271152 | 40544916 ~ 40553190 (+) |
| LOC110497841 | LOC106598867 | coding | downstream | 285515 | 40559279 ~ 40562442 (+) |
| LOC110497848 | rtn1 | coding | downstream | 433837 | 40707601 ~ 40757224 (+) |
| LOC110497851 | rd3l | coding | downstream | 508169 | 40781933 ~ 40785680 (+) |
| G1623539 | NA | non-coding | upstream | 2951 | 40270186 ~ 40270584 (+) |
| G1623537 | LOC106613263 | non-coding | upstream | 3468 | 40269853 ~ 40270067 (+) |
| G1623523 | NA | non-coding | upstream | 14386 | 40258885 ~ 40259149 (+) |
| G1622547 | NA | non-coding | upstream | 80747 | 40192575 ~ 40192788 (+) |
| G1622531 | NA | non-coding | upstream | 100573 | 40172744 ~ 40172962 (+) |
| G1623561 | NA | non-coding | downstream | 7623 | 40281387 ~ 40281634 (+) |
| G1623575 | NA | non-coding | downstream | 18339 | 40292103 ~ 40292379 (+) |
| G1623579 | NA | non-coding | downstream | 43561 | 40317325 ~ 40362584 (+) |
| G1623578 | hif-1a | non-coding | downstream | 80118 | 40353882 ~ 40356016 (+) |
| G1623624 | NA | non-coding | downstream | 118836 | 40392600 ~ 40396042 (+) |
| G1622452 | LOC106599102 | other | upstream | 211194 | 40051939 ~ 40062341 (+) |
| G1622047 | LOC106599718 | other | upstream | 1009645 | 39242203 ~ 39263890 (+) |
| G1621935 | NA | other | upstream | 1253007 | 38992643 ~ 39020528 (+) |
| G1621909 | NA | other | upstream | 1344352 | 38928586 ~ 38929183 (+) |
| commd8 | LOC106600549 | other | upstream | 1570020 | 38686057 ~ 38703559 (+) |
| plk4 | LOC106597351 | other | downstream | 710333 | 40984051 ~ 40993783 (+) |
| G1624239 | NA | other | downstream | 1170757 | 41444521 ~ 41446361 (+) |
| G1624560 | NA | other | downstream | 1736197 | 42009961 ~ 42010330 (+) |
| tmem260 | LOC106593970 | other | downstream | 1750844 | 41988770 ~ 42029506 (+) |
| G1624565 | LOC100846954 | other | downstream | 1761589 | 42035353 ~ 42035944 (+) |
