G1623572


Basic Information

Item Value
gene id G1623572
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 40282939 ~ 40283952 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1857852
ggtaggttaggtaagtagtgggtagacaggtgaggtaggagagggtaagttaggtaagtagtgggtaggcaggtaaggtaggagaggaggctttgacatttactttctttgctttggttccgttcagccccttttccccaaatTTACCATGTGAAGGAATAAATTCCCAGTAAACAGTAAATTCTCTgcctttgtcatccttactcgcacctacaatcccatacctctttcacgcCACGGGGAGTTGAATTGTAGCAGGGGTTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1857852 True 266 lncRNA 0.46 3 40282939 40283952

Neighbor

gene id symbol gene type direction distance location
LOC110497830 LOC106599033 coding downstream 47208 40201756 ~ 40235731 (-)
LOC118941474 NA coding downstream 53939 40225965 ~ 40229000 (-)
kcnh5b LOC106599078 coding downstream 88671 40111716 ~ 40194268 (-)
syne2b LOC106599102 coding downstream 184960 39955126 ~ 40097979 (-)
LOC110497823 LOC106599217 coding downstream 590121 39689558 ~ 39692818 (-)
LOC110497831 sgpp1 coding upstream 10615 40294567 ~ 40312562 (-)
LOC110497832 NA coding upstream 29024 40312976 ~ 40316713 (-)
syt16 syt16 coding upstream 33352 40317304 ~ 40341212 (-)
snapc1b LOC106598946 coding upstream 58404 40342356 ~ 40349828 (-)
hif1a hif-1a coding upstream 69924 40353876 ~ 40375782 (-)
G1623540 NA non-coding downstream 12307 40270351 ~ 40270632 (-)
G1623534 NA non-coding downstream 14649 40268039 ~ 40268290 (-)
G1623533 NA non-coding downstream 15716 40266952 ~ 40267223 (-)
G1623454 NA non-coding downstream 83510 40197636 ~ 40199429 (-)
G1623442 NA non-coding downstream 93685 40188973 ~ 40189254 (-)
G1624649 NA non-coding upstream 105376 40389328 ~ 40390006 (-)
LOC110497839 NA non-coding upstream 146298 40430220 ~ 40465948 (-)
LOC110497838 trmt5 non-coding upstream 184318 40467344 ~ 40547622 (-)
G1624775 NA non-coding upstream 299891 40583843 ~ 40584868 (-)
G1623175 NA other downstream 601410 39675439 ~ 39681529 (-)
G1623037 LOC106586451 other downstream 871155 39396068 ~ 39411784 (-)
si:dkey-229e3.2 LOC106599591 other downstream 912673 39365257 ~ 39370631 (-)
G1622757 LOC106600509 other downstream 1323965 38957024 ~ 38958974 (-)
LOC110497753 spred1 other downstream 3514240 36654523 ~ 36840800 (-)
G1624738 NA other upstream 345813 40629765 ~ 40630208 (-)
G1624737 NA other upstream 346626 40630578 ~ 40631738 (-)
LOC110498350 NA other upstream 411523 40689096 ~ 40699267 (-)
LOC110497863 LOC106596965 other upstream 785811 41052866 ~ 41080347 (-)

Expression


Co-expression Network