G1624775


Basic Information

Item Value
gene id G1624775
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 40583843 ~ 40584868 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1859264
TAGCAAAACTGGTATTTGAATAGTCTGTTATTTATATTTGTTCATTAATGGTTCAGTGAAAACAACGTTTTTAAGAGTAGACCTATAGGCATAAAGGTTTGTAGCAGACCAGTTATGGCGGGCTAAAAAACGTAATGGCCAGATAGGCCTGCCCTACATTTGGTATTATGATGATATGATCGGTGATGCAGGGTTTACGCATTGAGATAGGCCCTTAAGTGTTTTTTGCGTTAGGGTTTTGCCTATGCTACTATTTGCAACTTTTACCGCTAGCATACATCCCTGGTTCTGATGAATACATTCCTATTAATTAGAACGTAAAGACGAGAGCTAGCTATTATAACGTAAATATGAGGGTAAACCGTGCATATATAGGCCTTCATCTGCTGTAAAAAATGTCCATCCCTCTTTCCGTGCGCTTGTATGATGTCAGTCCAAATGCGCATCATAAATAAGAAATTAAAAACACAGAAGTGCTGTTTTTCCAACGGTCCAGAGTTCTGGGTTGGGGCCTACACCTGGGTTTTCATCCAATTTCCAATTAATTAAACTAACCAGTGAAAGGAACACACTGTATTTCTCTGAACGTTTTTCAGCTGGAACAACACAGAAGTCAATGCAGTGTTTCGTTTTTTTGGATAAAGAGGAAGCATGTGAGGGGACGAAAAGGGGTGCTTTGAGTTTCTTTCAAATGATGGGGACAAAATGGCCGAATATTTCCGTTTCTATTGAAAATAAGGGCGACCAGGGGGATGCATGAAAAGGTATTTGTAGCAGTCAATAAGGTTGTCAAACTGGTCAGCGGTAATCAGCACTAATGATGAGGTCTAGGGTCCCCGCGTGAACAAAGGGGCGCTCCCAATGTTTTGTGAGCGGAAGCAACACGGGTTCCCCTTCAAAGAATGAACTGCAGTCAGGGTAGTCTGCCAGGGGTACGGAAATCAGAActtttgtgtagtgtgtgtgtgtttggcagcTGCTGCAATGTGAATTCGTGAGTTGGGCGATTAAAAGGATTTAATGACC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1859264 True 1026 lncRNA 0.42 1 40583843 40584868

Neighbor

gene id symbol gene type direction distance location
LOC110497838 trmt5 coding downstream 39834 40467344 ~ 40547622 (-)
LOC110497839 NA coding downstream 117895 40430220 ~ 40465948 (-)
LOC110497835 LOC106598906 coding downstream 167818 40382584 ~ 40416025 (-)
hif1a hif-1a coding downstream 208061 40353876 ~ 40375782 (-)
snapc1b LOC106598946 coding downstream 234015 40342356 ~ 40349828 (-)
LOC110497843 LOC106598791 coding upstream 1060 40585928 ~ 40588482 (-)
LOC110497844 LOC106598722 coding upstream 34584 40619452 ~ 40643379 (-)
LOC110497845 LOC106598670 coding upstream 81818 40666686 ~ 40674956 (-)
LOC110498350 NA coding upstream 104228 40689096 ~ 40699267 (-)
tdrd9 LOC106598466 coding upstream 172696 40757564 ~ 40788401 (-)
G1624649 NA non-coding downstream 193837 40389328 ~ 40390006 (-)
LOC110497832 NA non-coding downstream 267167 40312976 ~ 40316713 (-)
G1623572 NA non-coding downstream 299891 40282939 ~ 40283952 (-)
G1624780 NA non-coding upstream 9175 40594043 ~ 40594264 (-)
G1624781 NA non-coding upstream 9964 40594832 ~ 40595089 (-)
G1624817 NA non-coding upstream 96275 40681143 ~ 40681411 (-)
G1623175 NA other downstream 902314 39675439 ~ 39681529 (-)
G1623037 LOC106586451 other downstream 1172059 39396068 ~ 39411784 (-)
si:dkey-229e3.2 LOC106599591 other downstream 1213577 39365257 ~ 39370631 (-)
G1622757 LOC106600509 other downstream 1624869 38957024 ~ 38958974 (-)
G1624738 NA other upstream 44897 40629765 ~ 40630208 (-)
G1624737 NA other upstream 45710 40630578 ~ 40631738 (-)
LOC110497863 LOC106596965 other upstream 484895 41052866 ~ 41080347 (-)
LOC110497865 LOC106611002 other upstream 559239 41144107 ~ 41162883 (-)

Expression


Co-expression Network