Gene
RNA
| Item | Value |
|---|---|
| gene id | G1624780 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 40594043 ~ 40594264 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1859271 | True | 222 | lncRNA | 0.41 | 1 | 40594043 | 40594264 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497843 | LOC106598791 | coding | downstream | 5561 | 40585928 ~ 40588482 (-) |
| LOC110497838 | trmt5 | coding | downstream | 50034 | 40467344 ~ 40547622 (-) |
| LOC110497839 | NA | coding | downstream | 128095 | 40430220 ~ 40465948 (-) |
| LOC110497835 | LOC106598906 | coding | downstream | 178018 | 40382584 ~ 40416025 (-) |
| hif1a | hif-1a | coding | downstream | 218261 | 40353876 ~ 40375782 (-) |
| LOC110497844 | LOC106598722 | coding | upstream | 25188 | 40619452 ~ 40643379 (-) |
| LOC110497845 | LOC106598670 | coding | upstream | 72422 | 40666686 ~ 40674956 (-) |
| LOC110498350 | NA | coding | upstream | 94832 | 40689096 ~ 40699267 (-) |
| tdrd9 | LOC106598466 | coding | upstream | 163300 | 40757564 ~ 40788401 (-) |
| LOC110497852 | NA | coding | upstream | 195327 | 40789591 ~ 40804305 (-) |
| G1624775 | NA | non-coding | downstream | 9175 | 40583843 ~ 40584868 (-) |
| G1624649 | NA | non-coding | downstream | 204037 | 40389328 ~ 40390006 (-) |
| LOC110497832 | NA | non-coding | downstream | 277367 | 40312976 ~ 40316713 (-) |
| G1624781 | NA | non-coding | upstream | 568 | 40594832 ~ 40595089 (-) |
| G1624817 | NA | non-coding | upstream | 86879 | 40681143 ~ 40681411 (-) |
| G1624923 | NA | non-coding | upstream | 310374 | 40904638 ~ 40905362 (-) |
| G1623175 | NA | other | downstream | 912514 | 39675439 ~ 39681529 (-) |
| G1623037 | LOC106586451 | other | downstream | 1182259 | 39396068 ~ 39411784 (-) |
| si:dkey-229e3.2 | LOC106599591 | other | downstream | 1223777 | 39365257 ~ 39370631 (-) |
| G1622757 | LOC106600509 | other | downstream | 1635069 | 38957024 ~ 38958974 (-) |
| G1624738 | NA | other | upstream | 35501 | 40629765 ~ 40630208 (-) |
| G1624737 | NA | other | upstream | 36314 | 40630578 ~ 40631738 (-) |
| LOC110497863 | LOC106596965 | other | upstream | 475499 | 41052866 ~ 41080347 (-) |
| LOC110497865 | LOC106611002 | other | upstream | 549843 | 41144107 ~ 41162883 (-) |
