Gene
RNA
| Item | Value |
|---|---|
| gene id | G1624954 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 40969533 ~ 40969797 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| SH3 domain-binding glutamic acid-rich-like protein isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1859454 | True | 265 | lncRNA | 0.52 | 1 | 40969533 | 40969797 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497858 | chmp3 | coding | downstream | 4306 | 40960368 ~ 40965227 (-) |
| LOC110497855 | LOC106597482 | coding | downstream | 9987 | 40950956 ~ 40959546 (-) |
| LOC110498351 | LOC106598081 | coding | downstream | 49378 | 40858672 ~ 40920155 (-) |
| LOC110497850 | LOC106598245 | coding | downstream | 111816 | 40811439 ~ 40857717 (-) |
| LOC110497852 | NA | coding | downstream | 165228 | 40789591 ~ 40804305 (-) |
| LOC110497861 | LOC106597151 | coding | upstream | 24206 | 40994003 ~ 41033626 (-) |
| LOC110497863 | LOC106596965 | coding | upstream | 83069 | 41052866 ~ 41080347 (-) |
| LOC110497865 | LOC106611002 | coding | upstream | 176367 | 41144107 ~ 41162883 (-) |
| LOC110497867 | LOC106596550 | coding | upstream | 203236 | 41173033 ~ 41189809 (-) |
| LOC110497872 | LOC106596263 | coding | upstream | 230048 | 41199845 ~ 41204084 (-) |
| G1624923 | NA | non-coding | downstream | 64171 | 40904638 ~ 40905362 (-) |
| LOC110498350 | NA | non-coding | downstream | 271824 | 40689096 ~ 40699267 (-) |
| G1624817 | NA | non-coding | downstream | 288122 | 40681143 ~ 40681411 (-) |
| LOC110497844 | LOC106598722 | non-coding | downstream | 341898 | 40619452 ~ 40643379 (-) |
| G1624781 | NA | non-coding | downstream | 374444 | 40594832 ~ 40595089 (-) |
| G1624936 | NA | non-coding | upstream | 80509 | 41050306 ~ 41051596 (-) |
| G1625032 | NA | non-coding | upstream | 151054 | 41120851 ~ 41122447 (-) |
| G1625067 | NA | non-coding | upstream | 226848 | 41196645 ~ 41196974 (-) |
| G1625105 | NA | non-coding | upstream | 299022 | 41268819 ~ 41272024 (-) |
| G1625092 | NA | non-coding | upstream | 330340 | 41300137 ~ 41300971 (-) |
| G1624737 | NA | other | downstream | 337795 | 40630578 ~ 40631738 (-) |
| G1624738 | NA | other | downstream | 339325 | 40629765 ~ 40630208 (-) |
| LOC110497838 | trmt5 | other | downstream | 421911 | 40467344 ~ 40547622 (-) |
| G1623175 | NA | other | downstream | 1288004 | 39675439 ~ 39681529 (-) |
| G1625066 | NA | other | upstream | 224636 | 41194433 ~ 41194759 (-) |
| G1625428 | arf6 | other | upstream | 876458 | 41846255 ~ 41850433 (-) |
| G1626105 | NA | other | upstream | 1285438 | 42255235 ~ 42255797 (-) |
