G1625206


Basic Information

Item Value
gene id G1625206
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 41443547 ~ 41446445 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1859731
GGGATGTAAaggcatacacacagagacatggatttaaaggcatacacacagagacagggatgtaaaggcatacacacagagacagggatgtaaaggcatacacacagagacaggtaagtaaaggcatacacacagagacatggatgTAAaggcatacagtacacacagagaCAAGGATGTAAaggcatacacacagagacaaggATGTAAaggcatacacacagagacaggtaagtaaaggcatacacacagagacagggatgtaaaggcatacagtacacacagagacaggtaagTAAAGGCATACACACAGATACATGGATGTAAAGGCATGcagtacacacagagacaggtaagtaaaggcatacacacagagacatggatgTAAaggcatacagtacacacagagacaggtaagtaaaggcatacacacagagacaggtaagtaaaggcatacacacagagacaggtaagtaaaggcatacacacagagacagggatgtaaaggcatacacacagagacagggatgtaaaggcatacagtacacacagagacaggtaagtaaaggcatacacacagagacagggatgtaaaggcatacagtacacacagagacaggtaagtaaaggcatacacacagagacaggtaagtaaaggcatacacacagagacaggtaagtaaaggcatacacacagagacaggtaagtaaaggcatacacacagagacaggtaagtaaaggcatacacacagagacaggtaagtaaaggcatacagtacacacagagaCAAGGATGTAAaggcatacacacagagacaaggATGTAAaggcatacacacagagacaggtaagtaaaggcatacacacagagacagggatgtaaaggcatacagtacacacagagacaggtaagtaaaggcatacacacagagacatggatgTAAaggcatacagtacacacagagacaggtaagtaaaggcatacacacagagacaggtaagtaaaggcatacacacagagacaggtaagtaaaggcatacacacagagacagggatgtaaaggcatacagtacacacagagacaggtaagtaaaggcatacacacagagacatggatgTAAaggcatacagtacacacagagacaggtaactaaaggcatacacacagagacaggtaagtaaaggcatacacacagagactgggATGTAAaggcatacagtacacacagagacaggtaagtaaagttatacacacagagacatggatgTAAaggcatacagtacacacagagacaggtaagtaaaggcatacacacagagacatggatgTAAaggcatacagtacacacagagacaggtaactaaaggcatacacacagagacaggtaagTAAAGGCATACCCATAGTGAATTATGCTTAGATATTATTCATGGATGGCATTCAACCAAGCAATCTTGCCAAATTTTTTATAGATAGATGTGCTGATTGTGGCGCCGCTTAAATCGTATTTGGAATGACTTTAAGGATGTCTGATATTGCTGATATCTCTATTGCTAAAGTACGTCTGCCATTTTTATCTCATTGTTTCGTTTAGTTCAGGCTTATTCTTTTTGTGGGGAGGAATGTAATTGTTATCATTcgttaacagacacacacatcaacattttttttaaccaacACCAGAGAGGTAGAACTGTAACTGCAAGACAGTAGTACCAACCCCATGAAGTGTTTCCGGTCACCAGCTCAAACAAACCCTAAGTGGGTTTATCTCATCAATAACATGATgataaacaaaacacatcaaTTAATCCCGTAAATATTGATTCAGAATGAACGTGATGGAAAAATAATGACCACATTATGAGacaccaaatatttattttgagCTGTATTGACTGATGCGTCTCATTGACTCCAATTAGAAATCCCTTAAGCCTACATTAGAGGCCCCTTCAATCACTTTATTCAGTTTCCTGAACCATCAGCACCAAAATGTTATCTTCATTTGGCCTGGTGTCTAAAGTCCCCCACCTGGCCCATTCATCAGCCACTCATTGGGCATCTGCCTCCATTAGCTTCTATACGCTAAATTGAAAGCAGACCTCAGCCGCCTCCACCACTGTTTGATCAACATAGCTAATGGAGGCAGACTTCACTCATGTTTTCATTGGCCATGTCTCTTTGCCAAACGCTAAAGTTAAGAGGTGACACTAAATTAATTGGTCTCCAATGTGATAACTGTTTCTGAAAAAATGAAATCTCATTTGACGGTAGCCATTAGCGGTGTTATGCCAAATAGATCACACTGTCACAATTTGGGCCCAGCCCACCTATTAAATGTCATTAGTGTGGAGAATTTGGTAG

Function

NR:

description
PREDICTED: putative proline-rich protein 21

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1859731 True 2370 lncRNA 0.42 3 41443547 41446445

Neighbor

gene id symbol gene type direction distance location
LOC110497879 LOC106595751 coding downstream 107956 41333522 ~ 41335591 (-)
c19h14orf180 LOC106595839 coding downstream 138977 41287382 ~ 41304570 (-)
LOC110497873 LOC106596382 coding downstream 231926 41204234 ~ 41211621 (-)
LOC110497872 LOC106596263 coding downstream 239463 41199845 ~ 41204084 (-)
LOC110497867 LOC106596550 coding downstream 253738 41173033 ~ 41189809 (-)
LOC110498352 LOC106595507 coding upstream 116095 41562540 ~ 41695056 (-)
LOC110497882 LOC106595288 coding upstream 249410 41695855 ~ 41831838 (-)
LOC110498590 LOC106595288 coding upstream 298962 41745407 ~ 41765102 (-)
LOC110497880 LOC106595288 coding upstream 329404 41775849 ~ 41831526 (-)
vcpkmt vcpkmt coding upstream 421229 41867674 ~ 41870961 (-)
G1625191 NA non-coding downstream 18222 41425084 ~ 41425325 (-)
G1625190 NA non-coding downstream 19751 41423577 ~ 41423796 (-)
G1625187 NA non-coding downstream 22945 41420381 ~ 41420602 (-)
G1625178 NA non-coding downstream 33390 41409895 ~ 41410157 (-)
G1625124 NA non-coding downstream 127114 41316201 ~ 41316433 (-)
G1625266 NA non-coding upstream 67957 41514402 ~ 41514666 (-)
G1625274 NA non-coding upstream 82589 41529034 ~ 41529252 (-)
G1625287 NA non-coding upstream 99570 41546015 ~ 41546542 (-)
G1625290 NA non-coding upstream 101990 41548435 ~ 41548772 (-)
G1625380 NA non-coding upstream 237090 41683535 ~ 41683948 (-)
G1625066 NA other downstream 248788 41194433 ~ 41194759 (-)
LOC110497865 LOC106611002 other downstream 281135 41144107 ~ 41162883 (-)
LOC110497863 LOC106596965 other downstream 363448 41052866 ~ 41080347 (-)
LOC110498350 NA other downstream 747786 40689096 ~ 40699267 (-)
G1624737 NA other downstream 811809 40630578 ~ 40631738 (-)
G1625428 arf6 other upstream 399810 41846255 ~ 41850433 (-)
G1626105 NA other upstream 808790 42255235 ~ 42255797 (-)
LOC110498355 atg2b other upstream 1019380 42465705 ~ 42480874 (-)
G1626232 LOC106611303 other upstream 1194004 42640449 ~ 42641273 (-)
G1626324 NA other upstream 1312849 42759294 ~ 42838434 (-)

Expression


Co-expression Network