Gene
RNA
| Item | Value |
|---|---|
| gene id | G1625549 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 41995455 ~ 41995928 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1860116 | True | 263 | lncRNA | 0.38 | 2 | 41995455 | 41995928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| vcpkmt | vcpkmt | coding | downstream | 124494 | 41867674 ~ 41870961 (-) |
| LOC110497882 | LOC106595288 | coding | downstream | 163617 | 41695855 ~ 41831838 (-) |
| LOC110497880 | LOC106595288 | coding | downstream | 163929 | 41775849 ~ 41831526 (-) |
| LOC110498590 | LOC106595288 | coding | downstream | 230353 | 41745407 ~ 41765102 (-) |
| LOC110498352 | LOC106595507 | coding | downstream | 300399 | 41562540 ~ 41695056 (-) |
| LOC110497889 | LOC107085600 | coding | upstream | 56742 | 42052670 ~ 42062060 (-) |
| LOC110497892 | LOC106593771 | coding | upstream | 148644 | 42144572 ~ 42158726 (-) |
| LOC110498354 | LOC106593417 | coding | upstream | 176213 | 42172141 ~ 42173747 (-) |
| LOC118941476 | LOC106611023 | coding | upstream | 189273 | 42185201 ~ 42189497 (-) |
| LOC110497894 | LOC106593636 | coding | upstream | 194343 | 42190271 ~ 42213019 (-) |
| G1625490 | NA | non-coding | downstream | 56991 | 41938203 ~ 41938464 (-) |
| G1625439 | LOC106594233 | non-coding | downstream | 75503 | 41919238 ~ 41919952 (-) |
| G1625380 | NA | non-coding | downstream | 311507 | 41683535 ~ 41683948 (-) |
| G1625290 | NA | non-coding | downstream | 446683 | 41548435 ~ 41548772 (-) |
| G1625287 | NA | non-coding | downstream | 448913 | 41546015 ~ 41546542 (-) |
| G1625568 | LOC106593970 | non-coding | upstream | 31658 | 42027586 ~ 42029440 (-) |
| G1625571 | NA | non-coding | upstream | 41689 | 42037617 ~ 42037905 (-) |
| G1625575 | NA | non-coding | upstream | 47728 | 42043656 ~ 42043918 (-) |
| G1625598 | NA | non-coding | upstream | 94182 | 42090110 ~ 42090558 (-) |
| G1625601 | NA | non-coding | upstream | 97689 | 42093617 ~ 42093857 (-) |
| G1625428 | arf6 | other | downstream | 145022 | 41846255 ~ 41850433 (-) |
| G1625066 | NA | other | downstream | 800696 | 41194433 ~ 41194759 (-) |
| LOC110497865 | LOC106611002 | other | downstream | 833043 | 41144107 ~ 41162883 (-) |
| LOC110497863 | LOC106596965 | other | downstream | 915356 | 41052866 ~ 41080347 (-) |
| LOC110498350 | NA | other | downstream | 1299694 | 40689096 ~ 40699267 (-) |
| G1626105 | NA | other | upstream | 259307 | 42255235 ~ 42255797 (-) |
| LOC110498355 | atg2b | other | upstream | 469897 | 42465705 ~ 42480874 (-) |
| G1626232 | LOC106611303 | other | upstream | 644521 | 42640449 ~ 42641273 (-) |
| G1626324 | NA | other | upstream | 763366 | 42759294 ~ 42838434 (-) |
| G1627068 | NA | other | upstream | 1412799 | 43408727 ~ 43409109 (-) |
