Gene
RNA
| Item | Value |
|---|---|
| gene id | G1625603 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 42096103 ~ 42096333 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1860171 | True | 231 | lncRNA | 0.35 | 1 | 42096103 | 42096333 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497889 | LOC107085600 | coding | downstream | 34043 | 42052670 ~ 42062060 (-) |
| vcpkmt | vcpkmt | coding | downstream | 225142 | 41867674 ~ 41870961 (-) |
| LOC110497882 | LOC106595288 | coding | downstream | 264265 | 41695855 ~ 41831838 (-) |
| LOC110497892 | LOC106593771 | coding | upstream | 48239 | 42144572 ~ 42158726 (-) |
| LOC110498354 | LOC106593417 | coding | upstream | 75808 | 42172141 ~ 42173747 (-) |
| LOC118941476 | LOC106611023 | coding | upstream | 88868 | 42185201 ~ 42189497 (-) |
| LOC110497894 | LOC106593636 | coding | upstream | 93938 | 42190271 ~ 42213019 (-) |
| LOC110497897 | LOC106593433 | coding | upstream | 222763 | 42319096 ~ 42339822 (-) |
| G1625601 | NA | non-coding | downstream | 2246 | 42093617 ~ 42093857 (-) |
| G1625598 | NA | non-coding | downstream | 5545 | 42090110 ~ 42090558 (-) |
| G1625575 | NA | non-coding | downstream | 52185 | 42043656 ~ 42043918 (-) |
| G1625571 | NA | non-coding | downstream | 58198 | 42037617 ~ 42037905 (-) |
| G1625568 | LOC106593970 | non-coding | downstream | 66663 | 42027586 ~ 42029440 (-) |
| G1626075 | NA | non-coding | upstream | 119148 | 42215481 ~ 42215925 (-) |
| G1626082 | NA | non-coding | upstream | 132025 | 42228358 ~ 42229565 (-) |
| G1626084 | NA | non-coding | upstream | 135797 | 42232130 ~ 42232401 (-) |
| G1626096 | NA | non-coding | upstream | 154635 | 42250968 ~ 42251503 (-) |
| G1626106 | NA | non-coding | upstream | 159832 | 42256165 ~ 42256668 (-) |
| G1625428 | arf6 | other | downstream | 245670 | 41846255 ~ 41850433 (-) |
| G1625066 | NA | other | downstream | 901344 | 41194433 ~ 41194759 (-) |
| LOC110497865 | LOC106611002 | other | downstream | 933691 | 41144107 ~ 41162883 (-) |
| LOC110497863 | LOC106596965 | other | downstream | 1016004 | 41052866 ~ 41080347 (-) |
| LOC110498350 | NA | other | downstream | 1400342 | 40689096 ~ 40699267 (-) |
| G1626105 | NA | other | upstream | 158902 | 42255235 ~ 42255797 (-) |
| LOC110498355 | atg2b | other | upstream | 369492 | 42465705 ~ 42480874 (-) |
| G1626232 | LOC106611303 | other | upstream | 544116 | 42640449 ~ 42641273 (-) |
| G1626324 | NA | other | upstream | 662961 | 42759294 ~ 42838434 (-) |
| G1627068 | NA | other | upstream | 1312394 | 43408727 ~ 43409109 (-) |
