G1626082


Basic Information

Item Value
gene id G1626082
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42228358 ~ 42229565 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1860737
CTGGCactgcttgatctgtggcagAGGCCTGAAGTAgggagtcaggtgttgttgccagccatggctttccaccagcaccgtaccatcctccagtccaaccagctgtgggatgttgacccgtcacagtgctgtccttcacaaccCCAGCAATCTCTAACAAAGTGTAcactctggtctttctgaagcgCTGCTTGATGAGGCCGAAGCAAAGTCAGGGGCaaacttggtgtggcctgtgatcaggaagtgaaggtccagacTGTGGTGGAGCTTGTGCATGGTCCACCAGGCAAAATACCAGAGCACAAACTTGTTcttgttttggccactgcagttATTACAATTCAGGTCAGCAGTGTTTTACCAACTCCGtagttggtgaagaaatggtgcatgtagttgatgGCTGCGCTGCTGCCTTCTTTTGCTTGGGCcagctctcttttgatgactgtATGACTTGTGGATTAGTCAGGCGTGTTCTACTGATTtaatgctgaatcTGTAGCTAGATTTTTTACCTGTATACATTAATGAAAGCTTAATGGCAGACTGCAACCCCTTTTATAAGACACCCTGTGTTGTTTCTGTTTAGTTTACACAGCTTATTTGGTCCGTTgtgttccactgatttcaaaacgtgTCCTTGTCCAGAAAGTTGTCAATCACACCTTTTCCCCATGACCTTTGTCGATAACAGCTGATAAATTCATGCCAGCAATGTTATTGAGAACAGTAACAAcatatttgc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106561205

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1860737 True 751 lncRNA 0.46 2 42228358 42229565

Neighbor

gene id symbol gene type direction distance location
LOC110497894 LOC106593636 coding downstream 15339 42190271 ~ 42213019 (-)
LOC118941476 LOC106611023 coding downstream 38861 42185201 ~ 42189497 (-)
LOC110498354 LOC106593417 coding downstream 54611 42172141 ~ 42173747 (-)
LOC110497892 LOC106593771 coding downstream 69632 42144572 ~ 42158726 (-)
LOC110497889 LOC107085600 coding downstream 166298 42052670 ~ 42062060 (-)
LOC110497897 LOC106593433 coding upstream 89531 42319096 ~ 42339822 (-)
ngb1 ngb coding upstream 121832 42351397 ~ 42383265 (-)
LOC118941477 NA coding upstream 137965 42367530 ~ 42375160 (-)
LOC110497901 entpd5 coding upstream 170351 42399916 ~ 42414821 (-)
LOC110497902 aldh6a1 coding upstream 202419 42431984 ~ 42444258 (-)
G1626075 NA non-coding downstream 12433 42215481 ~ 42215925 (-)
G1625603 NA non-coding downstream 132025 42096103 ~ 42096333 (-)
G1625601 NA non-coding downstream 134501 42093617 ~ 42093857 (-)
G1625598 NA non-coding downstream 137800 42090110 ~ 42090558 (-)
G1625575 NA non-coding downstream 184440 42043656 ~ 42043918 (-)
G1626084 NA non-coding upstream 2565 42232130 ~ 42232401 (-)
G1626096 NA non-coding upstream 21403 42250968 ~ 42251503 (-)
G1626106 NA non-coding upstream 26600 42256165 ~ 42256668 (-)
G1626107 NA non-coding upstream 27661 42257226 ~ 42257477 (-)
G1626111 NA non-coding upstream 35006 42264571 ~ 42264782 (-)
G1625428 arf6 other downstream 377925 41846255 ~ 41850433 (-)
G1625066 NA other downstream 1033599 41194433 ~ 41194759 (-)
LOC110497865 LOC106611002 other downstream 1065946 41144107 ~ 41162883 (-)
LOC110497863 LOC106596965 other downstream 1148259 41052866 ~ 41080347 (-)
LOC110498350 NA other downstream 1532597 40689096 ~ 40699267 (-)
G1626105 NA other upstream 25670 42255235 ~ 42255797 (-)
LOC110498355 atg2b other upstream 236260 42465705 ~ 42480874 (-)
G1626232 LOC106611303 other upstream 410884 42640449 ~ 42641273 (-)
G1626324 NA other upstream 529729 42759294 ~ 42838434 (-)
G1627068 NA other upstream 1179162 43408727 ~ 43409109 (-)

Expression


Co-expression Network