G1625699


Basic Information

Item Value
gene id G1625699
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42238827 ~ 42239109 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1860281
ctcgggacagagggacagctgctcgggacagagggacagctgctcgggacagagggacagctgctcgggacagagggacagctgctcgggacagagggacagctgctccgggcggaggggctctagcggcccctggctgactggcggcccctggctgactggcggcactggcggcccctggttgactggcggcccctggctgactggcggcactggcggcccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1860281 True 223 lncRNA 0.73 2 42238827 42239109

Neighbor

gene id symbol gene type direction distance location
LOC110497895 NA coding upstream 8349 42228256 ~ 42230812 (+)
LOC110497893 NA coding upstream 76540 42158731 ~ 42162287 (+)
tmem260 LOC106593970 coding upstream 209376 41988770 ~ 42029506 (+)
LOC110497886 LOC106594164 coding upstream 254736 41941804 ~ 41984091 (+)
LOC100305273 ktn1 coding upstream 302069 41892564 ~ 41936758 (+)
LOC110497896 LOC106593515 coding downstream 37869 42276978 ~ 42300523 (+)
LOC110497898 tmem63c coding downstream 101858 42340967 ~ 42375186 (+)
LOC110497900 NA coding downstream 149767 42388876 ~ 42398844 (+)
LOC110497904 bbof1 coding downstream 182644 42421753 ~ 42431912 (+)
gstz1 gstz1 coding downstream 205330 42444439 ~ 42448291 (+)
G1625677 NA non-coding upstream 30920 42206985 ~ 42207907 (+)
G1625640 LOC106593771 non-coding upstream 89109 42148917 ~ 42149718 (+)
G1625629 NA non-coding upstream 113083 42125435 ~ 42125744 (+)
G1624595 NA non-coding upstream 148217 42090406 ~ 42090610 (+)
G1625702 NA non-coding downstream 6009 42245118 ~ 42245379 (+)
G1625713 NA non-coding downstream 16272 42255381 ~ 42255642 (+)
G1625714 NA non-coding downstream 16670 42255779 ~ 42256037 (+)
G1625718 NA non-coding downstream 27645 42266754 ~ 42266958 (+)
G1625761 NA non-coding downstream 98389 42337498 ~ 42337713 (+)
G1624524 NA other upstream 201709 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 202883 42035353 ~ 42035944 (+)
G1624560 NA other upstream 228497 42009961 ~ 42010330 (+)
G1624239 NA other upstream 792466 41444521 ~ 41446361 (+)
G1625710 NA other downstream 11622 42250731 ~ 42251571 (+)
LOC110497931 LOC106589425 other downstream 1072731 43279273 ~ 43440028 (+)
G1627319 NA other downstream 1575617 43814593 ~ 43816501 (+)
G1628073 LOC106610840 other downstream 2175213 44414322 ~ 44448672 (+)
G1628486 NA other downstream 2444253 44683362 ~ 44748925 (+)

Expression


Co-expression Network