G1625823


Basic Information

Item Value
gene id G1625823
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42475532 ~ 42475793 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1860433
CCGACTAGCTCCTTGAAGGTGAGCTCCATCTTGGTCTGCTCCCCTGTGAACTCTGTCTTCACCTCCAGGTCCTCCAGGTCCAGGTACAGAACCTTCTTCTGCGAGGACTTCTTAAACCAGGGGCCCCTCTCCTGGTCCGAGCGCAGGTCTGGGATAGGGAAGCGCACCACCAGGCTCAACACAGGCGTTGACTGTTATCGACAAGTGGGTGTTGGCCGGAGTACGGCTGTCATCAAGGAAGACCTCTGTAAAGGCCTTGTGC

Function

NR:

description
PREDICTED: autophagy-related protein 2 homolog B isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1860433 True 262 lncRNA 0.57 1 42475532 42475793

Neighbor

gene id symbol gene type direction distance location
gstz1 gstz1 coding upstream 27241 42444439 ~ 42448291 (+)
LOC110497904 bbof1 coding upstream 43620 42421753 ~ 42431912 (+)
LOC110497900 NA coding upstream 76688 42388876 ~ 42398844 (+)
LOC110497898 tmem63c coding upstream 100346 42340967 ~ 42375186 (+)
LOC110497896 LOC106593515 coding upstream 175009 42276978 ~ 42300523 (+)
LOC110497909 gskip coding downstream 5209 42481002 ~ 42484731 (+)
isca2 LOC106591720 coding downstream 16425 42492218 ~ 42494071 (+)
LOC110497912 LOC106591546 coding downstream 88525 42564318 ~ 42570994 (+)
LOC110497914 nek9 coding downstream 101991 42577784 ~ 42588877 (+)
LOC110497916 LOC106591288 coding downstream 134288 42610081 ~ 42619496 (+)
G1625822 NA non-coding upstream 284 42475040 ~ 42475248 (+)
G1625761 NA non-coding upstream 137819 42337498 ~ 42337713 (+)
G1625718 NA non-coding upstream 208574 42266754 ~ 42266958 (+)
G1625714 NA non-coding upstream 219495 42255779 ~ 42256037 (+)
G1625813 NA non-coding downstream 19860 42495653 ~ 42497282 (+)
G1625828 LOC106611036 non-coding downstream 22162 42497955 ~ 42498451 (+)
G1625888 NA non-coding downstream 113509 42589302 ~ 42589684 (+)
G1625915 NA non-coding downstream 162738 42638531 ~ 42638756 (+)
G1625918 NA non-coding downstream 166184 42641977 ~ 42642356 (+)
G1625710 NA other upstream 223961 42250731 ~ 42251571 (+)
G1624524 NA other upstream 438414 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 439588 42035353 ~ 42035944 (+)
tmem260 LOC106593970 other upstream 446026 41988770 ~ 42029506 (+)
G1624560 NA other upstream 465202 42009961 ~ 42010330 (+)
LOC110497931 LOC106589425 other downstream 836047 43279273 ~ 43440028 (+)
G1627319 NA other downstream 1338933 43814593 ~ 43816501 (+)
G1628073 LOC106610840 other downstream 1938529 44414322 ~ 44448672 (+)
G1628486 NA other downstream 2207569 44683362 ~ 44748925 (+)
G1628488 NA other downstream 2212589 44688382 ~ 44747446 (+)

Expression


Co-expression Network