G1626212



Basic Information


Item Value
gene id G1626212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42486722 ~ 42486974 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1860886
cagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtacattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtgtaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggtgtaaaag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1860886 True 253 lncRNA 0.41 1 42486722 42486974

Neighbor


gene id symbol gene type direction distance location
LOC110498355 atg2b coding downstream 5848 42465705 ~ 42480874 (-)
noxred1 noxred1 coding downstream 21117 42459451 ~ 42465605 (-)
LOC110497908 tmed8 coding downstream 27353 42455455 ~ 42459369 (-)
LOC110497906 NA coding downstream 35705 42448377 ~ 42451017 (-)
LOC110497902 aldh6a1 coding downstream 42464 42431984 ~ 42444258 (-)
npc2 npc2 coding upstream 2883 42489857 ~ 42492062 (-)
eml5 LOC106591625 coding upstream 7484 42494458 ~ 42561969 (-)
LOC110497913 NA coding upstream 83854 42570828 ~ 42571457 (-)
LOC110497915 LOC106591465 coding upstream 114784 42601758 ~ 42604764 (-)
erg28 LOC106591002 coding upstream 182062 42669036 ~ 42671081 (-)
G1626190 NA non-coding downstream 38418 42445613 ~ 42448304 (-)
G1626160 NA non-coding downstream 106287 42378654 ~ 42380435 (-)
G1626158 NA non-coding downstream 109449 42377039 ~ 42377273 (-)
LOC118941477 NA non-coding downstream 111562 42367530 ~ 42375160 (-)
G1626254 NA non-coding upstream 77381 42564355 ~ 42565402 (-)
G1626231 NA non-coding upstream 99961 42586935 ~ 42588868 (-)
G1626267 NA non-coding upstream 104008 42590982 ~ 42591311 (-)
G1626288 NA non-coding upstream 160615 42647589 ~ 42647792 (-)
G1626291 NA non-coding upstream 163156 42650130 ~ 42650687 (-)
G1626105 NA other downstream 230925 42255235 ~ 42255797 (-)
G1625428 arf6 other downstream 636289 41846255 ~ 41850433 (-)
G1625066 NA other downstream 1291963 41194433 ~ 41194759 (-)
LOC110497865 LOC106611002 other downstream 1324310 41144107 ~ 41162883 (-)
G1626232 LOC106611303 other upstream 153475 42640449 ~ 42641273 (-)
G1626324 NA other upstream 272320 42759294 ~ 42838434 (-)
G1627068 NA other upstream 921753 43408727 ~ 43409109 (-)
LOC110498001 NA other upstream 3516791 46003765 ~ 46008718 (-)
G1631005 NA other upstream 4132233 46619207 ~ 46629506 (-)

Expression



Co-expression Network