G1625915


Basic Information

Item Value
gene id G1625915
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42638531 ~ 42638756 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1860552
TCCTTTTATAGATGAATTAATCCAGCCGTATAGTGAGTTACATGCATAGTGACAAGCATGTCCTAAAAACTGAATTGAGATGATTTTCTTTGGCGGTTTCACAtggcaaggaggagcactgctcCAACAAAGTAGCTTTCCAATTTCCAAGCAATCACAGTTTTAGTCAGCCTTTTTGCTGGATTATCTCCTTTCAGAGCTCACTTTTGTATGGAATATTGTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1860552 True 226 lncRNA 0.38 1 42638531 42638756

Neighbor

gene id symbol gene type direction distance location
LOC110497917 atf3 coding upstream 10431 42620570 ~ 42628100 (+)
LOC110497916 LOC106591288 coding upstream 19035 42610081 ~ 42619496 (+)
LOC110497914 nek9 coding upstream 49654 42577784 ~ 42588877 (+)
LOC110497912 LOC106591546 coding upstream 67537 42564318 ~ 42570994 (+)
isca2 LOC106591720 coding upstream 144460 42492218 ~ 42494071 (+)
ttll5 ttll5 coding downstream 32484 42671240 ~ 42765750 (+)
LOC110497923 LOC106590872 coding downstream 152199 42790955 ~ 42811478 (+)
LOC110498356 NA coding downstream 223896 42862652 ~ 42877342 (+)
LOC110497924 esrrb coding downstream 343489 42982245 ~ 43039659 (+)
LOC110497925 LOC106590001 coding downstream 472946 43111702 ~ 43125556 (+)
G1625888 NA non-coding upstream 48847 42589302 ~ 42589684 (+)
G1625828 LOC106611036 non-coding upstream 140080 42497955 ~ 42498451 (+)
G1625813 NA non-coding upstream 141249 42495653 ~ 42497282 (+)
G1625823 NA non-coding upstream 162738 42475532 ~ 42475793 (+)
G1625822 NA non-coding upstream 163283 42475040 ~ 42475248 (+)
G1625918 NA non-coding downstream 3221 42641977 ~ 42642356 (+)
G1625919 NA non-coding downstream 3822 42642578 ~ 42643263 (+)
G1625923 NA non-coding downstream 11089 42649845 ~ 42650111 (+)
G1625929 NA non-coding downstream 17137 42655893 ~ 42656209 (+)
G1625934 NA non-coding downstream 26008 42664764 ~ 42664993 (+)
G1625710 NA other upstream 386960 42250731 ~ 42251571 (+)
G1624524 NA other upstream 601413 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 602587 42035353 ~ 42035944 (+)
tmem260 LOC106593970 other upstream 609025 41988770 ~ 42029506 (+)
G1624560 NA other upstream 628201 42009961 ~ 42010330 (+)
LOC110497931 LOC106589425 other downstream 673084 43279273 ~ 43440028 (+)
G1627319 NA other downstream 1175970 43814593 ~ 43816501 (+)
G1628073 LOC106610840 other downstream 1775566 44414322 ~ 44448672 (+)
G1628486 NA other downstream 2044606 44683362 ~ 44748925 (+)
G1628488 NA other downstream 2049626 44688382 ~ 44747446 (+)

Expression


Co-expression Network