G1626291


Basic Information

Item Value
gene id G1626291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42650130 ~ 42650687 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1860973
CTCATTGTCCCCGTTTAAAAATGGTCTTACACTGATACAAGTCGAAAACAACGTCACAAGTTTATGGGCCATGGCTCCGTTTGTCGTCTACCAAGAGTTTATTATGAGTTGTTGGTACATAGACAATGCCAGGGGAAAGGAAATACTGACATTAAAATGTCATGTATTCAACACCTCATACTGGCATTATAATGAATTCAACACCTAAGGCTCATAATGATTGGAAGAGTTATATGTTATAATGGGAATGAGTTTAGGAAGGAGTAACTACTGACCAGCTCTGTGTGTTATCCATAGGCCATTCTGTATGTATTAGAATGGCCATTTTCCCTCGGGACTTACTGAAGACTACGAGGATGAAGATCACGGTGGCCATTCCAGCAGTGATGTAGAACATGATGCTGATGTGGTATGCCAGATCGTCCATATCATCAACATTTGGCACGAGGATGGGCGGCACCAGAAAGCCAATGGCAATGCCCATCTGTAAGTGAGGGAGACAAAAATACACGATCAGTCAATGACTCCTGCCATcacacctccacacacatacaaagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1860973 True 558 lncRNA 0.43 1 42650130 42650687

Neighbor

gene id symbol gene type direction distance location
LOC110497915 LOC106591465 coding downstream 45366 42601758 ~ 42604764 (-)
LOC110497913 NA coding downstream 78673 42570828 ~ 42571457 (-)
eml5 LOC106591625 coding downstream 88161 42494458 ~ 42561969 (-)
npc2 npc2 coding downstream 158068 42489857 ~ 42492062 (-)
LOC110498355 atg2b coding downstream 169256 42465705 ~ 42480874 (-)
erg28 LOC106591002 coding upstream 18349 42669036 ~ 42671081 (-)
tgfb3 LOC106590795 coding upstream 114190 42764877 ~ 42786064 (-)
LOC110498358 LOC106590063 coding upstream 449538 43100225 ~ 43110498 (-)
LOC110497926 LOC106589845 coding upstream 474747 43125434 ~ 43135492 (-)
LOC110498359 LOC106599825 coding upstream 485513 43136200 ~ 43139430 (-)
G1626288 NA non-coding downstream 2338 42647589 ~ 42647792 (-)
G1626267 NA non-coding downstream 58819 42590982 ~ 42591311 (-)
G1626231 NA non-coding downstream 61262 42586935 ~ 42588868 (-)
G1626254 NA non-coding downstream 84728 42564355 ~ 42565402 (-)
G1626212 NA non-coding downstream 163156 42486722 ~ 42486974 (-)
G1626294 NA non-coding upstream 3822 42654509 ~ 42655253 (-)
G1626296 NA non-coding upstream 5668 42656355 ~ 42657840 (-)
G1626297 NA non-coding upstream 7221 42657908 ~ 42664575 (-)
G1626299 NA non-coding upstream 14180 42664867 ~ 42665221 (-)
G1626232 LOC106611303 other downstream 8857 42640449 ~ 42641273 (-)
G1626105 NA other downstream 394333 42255235 ~ 42255797 (-)
G1625428 arf6 other downstream 799697 41846255 ~ 41850433 (-)
G1625066 NA other downstream 1455371 41194433 ~ 41194759 (-)
G1626324 NA other upstream 108607 42759294 ~ 42838434 (-)
G1627068 NA other upstream 758040 43408727 ~ 43409109 (-)
LOC110498001 NA other upstream 3353078 46003765 ~ 46008718 (-)
G1631005 NA other upstream 3968520 46619207 ~ 46629506 (-)
G1631120 LOC106612182 other upstream 4179647 46830334 ~ 46830650 (-)

Expression


Co-expression Network