G1626296


Basic Information

Item Value
gene id G1626296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42656355 ~ 42657840 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1860978
GGAATGCATGGGTCATACATAGCATACATATTTAGGAATACACAGGACATGTATAGCCTTTGAAACAATATGGGAAATGTCCTACTGTATATAGAAAATGTGTTAATTTTCATCATGATCATTATAAGTCACTAGAGGGCATTATTACTCCATGATGAATGTTAGACACAGCTGTTATGCAATGTCTGCTTGACTGACACAATGATCTGAGGAGTCATGCACTACTAGAGCCCCATATAATGTGGATTACATAACATGTCACTGTGCTTAACTATAACAACTGCAGGCAAAGGAGTCCAATGTTCAATCAACTGTAAAGCTATCCTGGGGGGGGTGCAAACTCTACCTGTCATAATGGTCCCTATGAGGAGGAAGACACATAAAAAGATGTTCCCAGCGAATGTGCCAAAGTGGTCTATGATCTTCCCTTGACCGATGGTGAATATGATCCCAAATATCTGGAAGATGGAGGGCAAATGAGGGGAGTCAGCATGAGAGTTGATCATCTCTAAACACattcatacatacagtagacCTCATGCATACGACAAACCTTTCGATGCTGTCATTAGTATGGTCCCTGTTACCTGAGCTGAACAGTTGAGCAGGCCTGAGGAGGTGCCCTCACCCTCTGGGAAGGTCAGCTCCACAGCAAACTCAAAGCCAAGTGGCAGGTACCCAGTCATGAAGAACCTAAAGAAATAGGAGGTTTATCAGTGTTGTTGGTACTTGAGCTAAAGCACACTTTAACATTTCATGCCTGCTGTAAAATAATGAATGTTGCACAGAATCATTAAAATGAGCTTGTCTGCCACAACACTTTgcattaaattgtattttaacaCAACTAATCAGTGTCTCAAGATGTCGTCTGTCTCTTCTCACAGAGTGGCTGTTTAAAGAGCAAGGAGGCAGTTTGAAAAATAGCATACAGTGTTCCTGGAGTGTGACCAGAAAAGAAGGCCTAGTCTTATCCTCTCTTACGACTGACATGTTAGAGGTGGGAATAGCTGAGAAATGCAAATCATTCACAAACATCATTGTGTTTGGTCACAGTGTTTGTTCACTCTTACCCTAGAGCCCCTGATGTCACAAACACCACCCATAGGTGGTCTAAGTTCAGAGTGAAGGCATAGACCACCATTCCCACGAAGGACATGAGATACACAGCCAGGGTAGTCTGTCTGGGGAGAAAGGTAAacattatttgtttgttttatccTGCTTTTGCCTGTATGAaatctactgtatgtttgtataAACAAAAATGTTCAAACTTCATTTGGTGCCTTGCTCAATATTGTATAACCCATACAGGATTTGAATGAGTCTGCAATGTTTTTATCT

Function

NR:

description
PREDICTED: feline leukemia virus subgroup C receptor-related protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1860978 True 1347 lncRNA 0.41 2 42656355 42657840

Neighbor

gene id symbol gene type direction distance location
LOC110497915 LOC106591465 coding downstream 51591 42601758 ~ 42604764 (-)
LOC110497913 NA coding downstream 84898 42570828 ~ 42571457 (-)
eml5 LOC106591625 coding downstream 94386 42494458 ~ 42561969 (-)
npc2 npc2 coding downstream 164293 42489857 ~ 42492062 (-)
LOC110498355 atg2b coding downstream 175481 42465705 ~ 42480874 (-)
erg28 LOC106591002 coding upstream 11196 42669036 ~ 42671081 (-)
tgfb3 LOC106590795 coding upstream 107037 42764877 ~ 42786064 (-)
LOC110498358 LOC106590063 coding upstream 442385 43100225 ~ 43110498 (-)
LOC110497926 LOC106589845 coding upstream 467594 43125434 ~ 43135492 (-)
LOC110498359 LOC106599825 coding upstream 478360 43136200 ~ 43139430 (-)
G1626294 NA non-coding downstream 1102 42654509 ~ 42655253 (-)
G1626291 NA non-coding downstream 5668 42650130 ~ 42650687 (-)
G1626288 NA non-coding downstream 8563 42647589 ~ 42647792 (-)
G1626267 NA non-coding downstream 65044 42590982 ~ 42591311 (-)
G1626231 NA non-coding downstream 67487 42586935 ~ 42588868 (-)
G1626297 NA non-coding upstream 68 42657908 ~ 42664575 (-)
G1626299 NA non-coding upstream 7027 42664867 ~ 42665221 (-)
G1626300 NA non-coding upstream 13670 42671510 ~ 42672284 (-)
G1626303 NA non-coding upstream 18567 42676407 ~ 42676971 (-)
G1626232 LOC106611303 other downstream 15082 42640449 ~ 42641273 (-)
G1626105 NA other downstream 400558 42255235 ~ 42255797 (-)
G1625428 arf6 other downstream 805922 41846255 ~ 41850433 (-)
G1625066 NA other downstream 1461596 41194433 ~ 41194759 (-)
G1626324 NA other upstream 101454 42759294 ~ 42838434 (-)
G1627068 NA other upstream 750887 43408727 ~ 43409109 (-)
LOC110498001 NA other upstream 3345925 46003765 ~ 46008718 (-)
G1631005 NA other upstream 3961367 46619207 ~ 46629506 (-)
G1631120 LOC106612182 other upstream 4172494 46830334 ~ 46830650 (-)

Expression


Co-expression Network