Gene
RNA
| Item | Value |
|---|---|
| gene id | G1626303 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 42676407 ~ 42676971 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tubulin polyglutamylase TTLL5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1860985 | True | 565 | lncRNA | 0.42 | 1 | 42676407 | 42676971 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| erg28 | LOC106591002 | coding | downstream | 5326 | 42669036 ~ 42671081 (-) |
| LOC110497915 | LOC106591465 | coding | downstream | 71643 | 42601758 ~ 42604764 (-) |
| LOC110497913 | NA | coding | downstream | 104950 | 42570828 ~ 42571457 (-) |
| eml5 | LOC106591625 | coding | downstream | 114438 | 42494458 ~ 42561969 (-) |
| npc2 | npc2 | coding | downstream | 184345 | 42489857 ~ 42492062 (-) |
| tgfb3 | LOC106590795 | coding | upstream | 87906 | 42764877 ~ 42786064 (-) |
| LOC110498358 | LOC106590063 | coding | upstream | 423254 | 43100225 ~ 43110498 (-) |
| LOC110497926 | LOC106589845 | coding | upstream | 448463 | 43125434 ~ 43135492 (-) |
| LOC110498359 | LOC106599825 | coding | upstream | 459229 | 43136200 ~ 43139430 (-) |
| LOC110497927 | lrrc74a | coding | upstream | 464551 | 43141522 ~ 43148464 (-) |
| G1626300 | NA | non-coding | downstream | 4123 | 42671510 ~ 42672284 (-) |
| G1626299 | NA | non-coding | downstream | 11186 | 42664867 ~ 42665221 (-) |
| G1626297 | NA | non-coding | downstream | 11832 | 42657908 ~ 42664575 (-) |
| G1626296 | NA | non-coding | downstream | 18567 | 42656355 ~ 42657840 (-) |
| G1626306 | NA | non-coding | upstream | 2838 | 42679809 ~ 42680031 (-) |
| G1626307 | NA | non-coding | upstream | 3111 | 42680082 ~ 42680822 (-) |
| G1626308 | NA | non-coding | upstream | 3895 | 42680866 ~ 42681213 (-) |
| G1626309 | NA | non-coding | upstream | 4335 | 42681306 ~ 42681670 (-) |
| G1626310 | NA | non-coding | upstream | 6859 | 42683830 ~ 42684078 (-) |
| G1626232 | LOC106611303 | other | downstream | 35134 | 42640449 ~ 42641273 (-) |
| LOC110498355 | atg2b | other | downstream | 205705 | 42465705 ~ 42480874 (-) |
| G1626105 | NA | other | downstream | 420610 | 42255235 ~ 42255797 (-) |
| G1625428 | arf6 | other | downstream | 825974 | 41846255 ~ 41850433 (-) |
| G1625066 | NA | other | downstream | 1481648 | 41194433 ~ 41194759 (-) |
| G1626324 | NA | other | upstream | 82323 | 42759294 ~ 42838434 (-) |
| G1627068 | NA | other | upstream | 731756 | 43408727 ~ 43409109 (-) |
| LOC110498001 | NA | other | upstream | 3326794 | 46003765 ~ 46008718 (-) |
| G1631005 | NA | other | upstream | 3942236 | 46619207 ~ 46629506 (-) |
| G1631120 | LOC106612182 | other | upstream | 4153363 | 46830334 ~ 46830650 (-) |
